Literature DB >> 19478430

Expression, crystallization and preliminary crystallographic analysis of the PAS domain of RsbP, a stress-response phosphatase from Bacillus subtilis.

Masatomo Makino1, Shinpei Kondo, Tomonori Kaneko, Seiki Baba, Kunio Hirata, Takashi Kumasaka.   

Abstract

RsbP, a regulator of RNA polymerase sigma(B) activity in Bacillus subtilis, is a phosphatase containing a Per-Arnt-Sim (PAS) domain in its N-terminal region that is expected to sense energy stresses such as carbon, phosphate or oxygen starvation. Energy-stress signals are transmitted to the PAS domain and activate the C-terminal phosphatase domain of RsbP, leading to activation of the downstream anti-anti-sigma(B) factor RsbV. Finally, the general stress response is induced to protect the cells against further stresses. The recombinant PAS domain of RsbP was crystallized by the sitting-drop vapour-diffusion technique using 40% PEG 400 as a precipitant. The crystals belonged to space group P2(1), with unit-cell parameters a = 55.2, b = 71.7, c = 60.2 A, beta = 92.1 degrees . Diffraction data were collected to a resolution of 1.6 A.

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Year:  2009        PMID: 19478430      PMCID: PMC2688409          DOI: 10.1107/S1744309109014158

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  16 in total

1.  Identification of sigma(B)-dependent genes in Bacillus subtilis using a promoter consensus-directed search and oligonucleotide hybridization.

Authors:  A Petersohn; J Bernhardt; U Gerth; D Höper; T Koburger; U Völker; M Hecker
Journal:  J Bacteriol       Date:  1999-09       Impact factor: 3.490

2.  A PP2C phosphatase containing a PAS domain is required to convey signals of energy stress to the sigmaB transcription factor of Bacillus subtilis.

Authors:  K Vijay; M S Brody; E Fredlund; C W Price
Journal:  Mol Microbiol       Date:  2000-01       Impact factor: 3.501

Review 3.  PAS domains: internal sensors of oxygen, redox potential, and light.

Authors:  B L Taylor; I B Zhulin
Journal:  Microbiol Mol Biol Rev       Date:  1999-06       Impact factor: 11.056

4.  Matthews coefficient probabilities: Improved estimates for unit cell contents of proteins, DNA, and protein-nucleic acid complex crystals.

Authors:  Katherine A Kantardjieff; Bernhard Rupp
Journal:  Protein Sci       Date:  2003-09       Impact factor: 6.725

5.  Processing of X-ray diffraction data collected in oscillation mode.

Authors:  Z Otwinowski; W Minor
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

6.  Catalytic function of an alpha/beta hydrolase is required for energy stress activation of the sigma(B) transcription factor in Bacillus subtilis.

Authors:  M S Brody; K Vijay; C W Price
Journal:  J Bacteriol       Date:  2001-11       Impact factor: 3.490

7.  Four additional genes in the sigB operon of Bacillus subtilis that control activity of the general stress factor sigma B in response to environmental signals.

Authors:  A A Wise; C W Price
Journal:  J Bacteriol       Date:  1995-01       Impact factor: 3.490

8.  Crystal structures of RsbQ, a stress-response regulator in Bacillus subtilis.

Authors:  Tomonori Kaneko; Nobuo Tanaka; Takashi Kumasaka
Journal:  Protein Sci       Date:  2005-01-04       Impact factor: 6.725

9.  Genome-wide analysis of the general stress response in Bacillus subtilis.

Authors:  C W Price; P Fawcett; H Cérémonie; N Su; C K Murphy; P Youngman
Journal:  Mol Microbiol       Date:  2001-08       Impact factor: 3.501

10.  Separate mechanisms activate sigma B of Bacillus subtilis in response to environmental and metabolic stresses.

Authors:  U Voelker; A Voelker; B Maul; M Hecker; A Dufour; W G Haldenwang
Journal:  J Bacteriol       Date:  1995-07       Impact factor: 3.490

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  1 in total

1.  An α/β hydrolase and associated Per-ARNT-Sim domain comprise a bipartite sensing module coupled with diverse output domains.

Authors:  Eugene V Nadezhdin; Margaret S Brody; Chester W Price
Journal:  PLoS One       Date:  2011-09-29       Impact factor: 3.240

  1 in total

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