Literature DB >> 19477234

Eukaryotic selenoproteins and selenoproteomes.

Alexey V Lobanov1, Dolph L Hatfield, Vadim N Gladyshev.   

Abstract

Selenium is an essential trace element for which both beneficial and toxic effects in human health have been described. It is now clear that the importance of having adequate amounts of this micronutrient in the diet is primarily due to the fact that selenium is required for biosynthesis of selenocysteine, the twenty first naturally occurring amino acid in protein. In this review, we provide an overview of eukaryotic selenoproteins and selenoproteomes, which are sets of selenoproteins in these organisms. In eukaryotes, selenoproteins show a mosaic occurrence, with some organisms, such as vertebrates and algae, having dozens of these proteins, while other organisms, such as higher plants and fungi, having lost all selenoproteins during evolution. We also discuss selenoprotein functions and evolutionary trends in the use of these proteins in eukaryotes. Functional analysis of selenoproteins is critical for better understanding of the role of selenium in human health and disease.

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Year:  2009        PMID: 19477234      PMCID: PMC3471088          DOI: 10.1016/j.bbagen.2009.05.014

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  29 in total

Review 1.  Horizontal gene transfer in prokaryotes: quantification and classification.

Authors:  E V Koonin; K S Makarova; L Aravind
Journal:  Annu Rev Microbiol       Date:  2001       Impact factor: 15.500

2.  A novel RNA structural motif in the selenocysteine insertion element of eukaryotic selenoprotein mRNAs.

Authors:  R Walczak; E Westhof; P Carbon; A Krol
Journal:  RNA       Date:  1996-04       Impact factor: 4.942

3.  The properties of a rat serum protein labelled by the injection of sodium selenite.

Authors:  J L Herrman
Journal:  Biochim Biophys Acta       Date:  1977-11-07

4.  Selenocysteine-containing thioredoxin reductase in C. elegans.

Authors:  V N Gladyshev; M Krause; X M Xu; K V Korotkov; G V Kryukov; Q A Sun; B J Lee; J C Wootton; D L Hatfield
Journal:  Biochem Biophys Res Commun       Date:  1999-06-07       Impact factor: 3.575

Review 5.  Selenocysteine.

Authors:  T C Stadtman
Journal:  Annu Rev Biochem       Date:  1996       Impact factor: 23.643

6.  Characterization of mammalian selenoproteomes.

Authors:  Gregory V Kryukov; Sergi Castellano; Sergey V Novoselov; Alexey V Lobanov; Omid Zehtab; Roderic Guigó; Vadim N Gladyshev
Journal:  Science       Date:  2003-05-30       Impact factor: 47.728

7.  Chemical characterization of the selenoprotein component of clostridial glycine reductase: identification of selenocysteine as the organoselenium moiety.

Authors:  J E Cone; R M Del Río; J N Davis; T C Stadtman
Journal:  Proc Natl Acad Sci U S A       Date:  1976-08       Impact factor: 11.205

8.  Recognition of UGA as a selenocysteine codon in type I deiodinase requires sequences in the 3' untranslated region.

Authors:  M J Berry; L Banu; Y Y Chen; S J Mandel; J D Kieffer; J W Harney; P R Larsen
Journal:  Nature       Date:  1991-09-19       Impact factor: 49.962

9.  Functional characterization of the eukaryotic SECIS elements which direct selenocysteine insertion at UGA codons.

Authors:  M J Berry; L Banu; J W Harney; P R Larsen
Journal:  EMBO J       Date:  1993-08       Impact factor: 11.598

10.  SECISaln, a web-based tool for the creation of structure-based alignments of eukaryotic SECIS elements.

Authors:  Charles E Chapple; Roderic Guigó; Alain Krol
Journal:  Bioinformatics       Date:  2009-01-29       Impact factor: 6.937

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  86 in total

1.  Low doses of selenium specifically stimulate the repair of oxidative DNA damage in LNCaP prostate cancer cells.

Authors:  Viviana de Rosa; Pinar Erkekoğlu; Anne Forestier; Alain Favier; Filiz Hincal; Alan M Diamond; Thierry Douki; Walid Rachidi
Journal:  Free Radic Res       Date:  2012-01-25

Review 2.  Elemental economy: microbial strategies for optimizing growth in the face of nutrient limitation.

Authors:  Sabeeha S Merchant; John D Helmann
Journal:  Adv Microb Physiol       Date:  2012       Impact factor: 3.517

3.  Mutations disrupting selenocysteine formation cause progressive cerebello-cerebral atrophy.

Authors:  Orly Agamy; Bruria Ben Zeev; Dorit Lev; Barak Marcus; Dina Fine; Dan Su; Ginat Narkis; Rivka Ofir; Chen Hoffmann; Esther Leshinsky-Silver; Hagit Flusser; Sara Sivan; Dieter Söll; Tally Lerman-Sagie; Ohad S Birk
Journal:  Am J Hum Genet       Date:  2010-10-08       Impact factor: 11.025

Review 4.  Molecular cross-talk between members of distinct families of selenium containing proteins.

Authors:  Emmanuel Ansong; Wancai Yang; Alan M Diamond
Journal:  Mol Nutr Food Res       Date:  2013-11-13       Impact factor: 5.914

5.  Selenocysteine Insertion at a Predefined UAG Codon in a Release Factor 1 (RF1)-depleted Escherichia coli Host Strain Bypasses Species Barriers in Recombinant Selenoprotein Translation.

Authors:  Qing Cheng; Elias S J Arnér
Journal:  J Biol Chem       Date:  2017-02-13       Impact factor: 5.157

6.  dbTEU: a protein database of trace element utilization.

Authors:  Yan Zhang; Vadim N Gladyshev
Journal:  Bioinformatics       Date:  2010-01-06       Impact factor: 6.937

7.  Amblyomma maculatum SECIS binding protein 2 and putative selenoprotein P are indispensable for pathogen replication and tick fecundity.

Authors:  Khemraj Budachetri; Gary Crispell; Shahid Karim
Journal:  Insect Biochem Mol Biol       Date:  2017-07-21       Impact factor: 4.714

8.  Regulation of redox signaling by selenoproteins.

Authors:  Wayne Chris Hawkes; Zeynep Alkan
Journal:  Biol Trace Elem Res       Date:  2010-03-20       Impact factor: 3.738

9.  Selenoprofiles: profile-based scanning of eukaryotic genome sequences for selenoprotein genes.

Authors:  M Mariotti; R Guigó
Journal:  Bioinformatics       Date:  2010-09-21       Impact factor: 6.937

10.  Tardigrade workbench: comparing stress-related proteins, sequence-similar and functional protein clusters as well as RNA elements in tardigrades.

Authors:  Frank Förster; Chunguang Liang; Alexander Shkumatov; Daniela Beisser; Julia C Engelmann; Martina Schnölzer; Marcus Frohme; Tobias Müller; Ralph O Schill; Thomas Dandekar
Journal:  BMC Genomics       Date:  2009-10-12       Impact factor: 3.969

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