Literature DB >> 19475380

Functional dissection of mitotic regulators through gene targeting in human somatic cells.

Eli Berdougo1, Marie-Emilie Terret, Prasad V Jallepalli.   

Abstract

With the human genome fully sequenced (1, 2), biologists continue to face the challenging task of evaluating the function of each of the approximately 25,000 genes contained within it. Gene targeting in human cells provides a powerful and unique experimental tool in this regard (3-8). Although somewhat more involved than RNAi or pharmacological approaches, somatic cell gene targeting is a precise technique that avoids both incomplete knockdown and off-target effects, but is still much quicker than analogous manipulations in the mouse. Moreover, immortal knockout cell lines provide excellent platforms for both complementation analysis and biochemical purification of multiprotein complexes in native form. Here we present a detailed gene-targeting protocol that was recently applied to the mitotic regulator Polo-like kinase 1 (Plk1) (9).

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Year:  2009        PMID: 19475380     DOI: 10.1007/978-1-60327-993-2_2

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  25 in total

1.  Polo-like kinase 4 maintains centriolar satellite integrity by phosphorylation of centrosomal protein 131 (CEP131).

Authors:  Ryan A Denu; Madilyn M Sass; James M Johnson; Gregory K Potts; Alka Choudhary; Joshua J Coon; Mark E Burkard
Journal:  J Biol Chem       Date:  2019-02-25       Impact factor: 5.157

2.  Cohesin recruits the Esco1 acetyltransferase genome wide to repress transcription and promote cohesion in somatic cells.

Authors:  Sadia Rahman; Mathew J K Jones; Prasad V Jallepalli
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-24       Impact factor: 11.205

3.  The quantitative architecture of centromeric chromatin.

Authors:  Dani L Bodor; João F Mata; Mikhail Sergeev; Ana Filipa David; Kevan J Salimian; Tanya Panchenko; Don W Cleveland; Ben E Black; Jagesh V Shah; Lars Et Jansen
Journal:  Elife       Date:  2014-07-15       Impact factor: 8.140

4.  Distinct Roles of RZZ and Bub1-KNL1 in Mitotic Checkpoint Signaling and Kinetochore Expansion.

Authors:  Jose-Antonio Rodriguez-Rodriguez; Clare Lewis; Kara L McKinley; Vitali Sikirzhytski; Jennifer Corona; John Maciejowski; Alexey Khodjakov; Iain M Cheeseman; Prasad V Jallepalli
Journal:  Curr Biol       Date:  2018-10-25       Impact factor: 10.834

5.  Nuclear pores protect genome integrity by assembling a premitotic and Mad1-dependent anaphase inhibitor.

Authors:  Veronica Rodriguez-Bravo; John Maciejowski; Jennifer Corona; Håkon Kirkeby Buch; Philippe Collin; Masato T Kanemaki; Jagesh V Shah; Prasad V Jallepalli
Journal:  Cell       Date:  2014-02-27       Impact factor: 41.582

6.  A role for XLF in DNA repair and recombination in human somatic cells.

Authors:  Farjana Jahan Fattah; Junghun Kweon; Yongbao Wang; Eu Han Lee; Yinan Kan; Natalie Lichter; Natalie Weisensel; Eric A Hendrickson
Journal:  DNA Repair (Amst)       Date:  2014-01-21

7.  Vertebrate cells genetically deficient for Cdc14A or Cdc14B retain DNA damage checkpoint proficiency but are impaired in DNA repair.

Authors:  Annamaria Mocciaro; Eli Berdougo; Kang Zeng; Elizabeth Black; Paola Vagnarelli; William Earnshaw; David Gillespie; Prasad Jallepalli; Elmar Schiebel
Journal:  J Cell Biol       Date:  2010-05-17       Impact factor: 10.539

8.  Ku regulates the non-homologous end joining pathway choice of DNA double-strand break repair in human somatic cells.

Authors:  Farjana Fattah; Eu Han Lee; Natalie Weisensel; Yongbao Wang; Natalie Lichter; Eric A Hendrickson
Journal:  PLoS Genet       Date:  2010-02-26       Impact factor: 5.917

9.  Mps1 directs the assembly of Cdc20 inhibitory complexes during interphase and mitosis to control M phase timing and spindle checkpoint signaling.

Authors:  John Maciejowski; Kelly A George; Marie-Emilie Terret; Chao Zhang; Kevan M Shokat; Prasad V Jallepalli
Journal:  J Cell Biol       Date:  2010-07-12       Impact factor: 10.539

10.  A two-step mechanism for epigenetic specification of centromere identity and function.

Authors:  Daniele Fachinetti; H Diego Folco; Yael Nechemia-Arbely; Luis P Valente; Kristen Nguyen; Alex J Wong; Quan Zhu; Andrew J Holland; Arshad Desai; Lars E T Jansen; Don W Cleveland
Journal:  Nat Cell Biol       Date:  2013-07-21       Impact factor: 28.824

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