Literature DB >> 19473034

Formic acid dimerization: evidence for species diversity from first principles simulations.

Pawel Rodziewicz1, Nikos L Doltsinis.   

Abstract

Dimerization of formic acid has been simulated using ab initio molecular dynamics at conditions mimicking rare gas matrix isolation experiments. Aggregation product distributions and the corresponding reaction pathways have been studied as a function of temperature. At higher temperatures, the cyclic, C(2h) symmetric, global minimum structure A with two O-H...O horizontal lineC hydrogen bonds predominates over the second most stable, acyclic, local minimum isomer B with one O-H...O horizontal lineC and one C-H...O horizontal lineC hydrogen bond, whereas the latter is the main species at low temperature. Significant concentrations of two additional, less stable, local minimum species, C exhibiting an O-H...O horizontal lineC and an O-H...O(H)-C hydrogen bond, and D with an O-H...O(H)-C and a C-H...O horizontal lineC hydrogen bond, which should be detectable in experiment, are predicted at low temperature. Theoretical vibrational spectra are provided to guide the experimental search for these species. Furthermore, free-energy barriers for thermal interconversion of different dimer species have been calculated using targeted molecular dynamics in conjunction with thermodynamic integration. The small barrier for the C --> A reaction of 7.0 kJ/mol indicates that the C species can only be stabilized at ultracold conditions. The data presented here thus hold important clues for the execution and interpretation of low-temperature vibrational spectroscopy at matrix isolation or ultracold helium droplet conditions.

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Year:  2009        PMID: 19473034     DOI: 10.1021/jp9007575

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  2 in total

1.  Experimental, DFT dimeric modeling and AIM study of H-bond-mediated composite vibrational structure of Chelidonic acid.

Authors:  Shivanand S Malaganvi; Jayashree Tonannavar Yenagi; J Tonannavar
Journal:  Heliyon       Date:  2019-05-14

2.  Inter- vs. Intramolecular Hydrogen Bond Patterns and Proton Dynamics in Nitrophthalic Acid Associates.

Authors:  Kinga Jóźwiak; Aneta Jezierska; Jarosław J Panek; Eugene A Goremychkin; Peter M Tolstoy; Ilya G Shenderovich; Aleksander Filarowski
Journal:  Molecules       Date:  2020-10-14       Impact factor: 4.411

  2 in total

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