Literature DB >> 19472631

Effects of MRI acquisition parameter variations and protocol heterogeneity on the results of texture analysis and pattern discrimination: an application-oriented study.

Marius E Mayerhoefer1, Pavol Szomolanyi, Daniel Jirak, Andrzej Materka, Siegfried Trattnig.   

Abstract

MRI texture features are generally considered to be sensitive to variations in signal-to-noise ratio and spatial resolution, which represents an obstacle for the widespread clinical application of texture-based pattern discrimination with MRI. This study investigates the sensitivity of texture features of different categories (co-occurrence matrix, run-length matrix, absolute gradient, autoregressive model, and wavelet transform) to variations in the number of acquisitions (NAs), repetition time (TR), echo time (TE), and sampling bandwidth (SBW) at different spatial resolutions. Special emphasis was placed on the influence of MRI protocol heterogeneity and implications for the results of pattern discrimination. Experiments were performed using two polystyrene spheres and agar gel phantoms with different nodular patterns. T2-weighted multislice multiecho images were obtained using a 3.0 T scanner equipped with a microimaging gradient insert coil. Linear discriminant analysis and k nearest neighbor classification were used for texture-based pattern discrimination. Results show that texture features of all categories are increasingly sensitive to acquisition parameter variations with increasing spatial resolution. Nevertheless, as long as the spatial resolution is sufficiently high, variations in NA, TR, TE, and SBW have little effect on the results of pattern discrimination. Texture features derived from the co-occurrence matrix are superior to features of other categories because they enable discrimination of different patterns close to the resolution limits for the smallest structures of physical texture even for datasets that are heterogeneous with regard to different acquisition parameters, including spatial resolution.

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Year:  2009        PMID: 19472631     DOI: 10.1118/1.3081408

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  72 in total

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2.  A Machine Learning Approach for Classifying Ischemic Stroke Onset Time From Imaging.

Authors:  King Chung Ho; William Speier; Haoyue Zhang; Fabien Scalzo; Suzie El-Saden; Corey W Arnold
Journal:  IEEE Trans Med Imaging       Date:  2019-02-25       Impact factor: 10.048

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Journal:  J Med Imaging (Bellingham)       Date:  2018-09-06

4.  Systematic analysis of bias and variability of texture measurements in computed tomography.

Authors:  Marthony Robins; Justin Solomon; Jocelyn Hoye; Ehsan Abadi; Daniele Marin; Ehsan Samei
Journal:  J Med Imaging (Bellingham)       Date:  2019-07-12

5.  Preoperative Prediction of Extracapsular Extension: Radiomics Signature Based on Magnetic Resonance Imaging to Stage Prostate Cancer.

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Journal:  Mol Imaging Biol       Date:  2020-06       Impact factor: 3.488

Review 6.  Texture analysis of medical images for radiotherapy applications.

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Journal:  Br J Radiol       Date:  2016-11-25       Impact factor: 3.039

7.  Magnetic resonance imaging texture analysis classification of primary breast cancer.

Authors:  S A Waugh; C A Purdie; L B Jordan; S Vinnicombe; R A Lerski; P Martin; A M Thompson
Journal:  Eur Radiol       Date:  2015-06-12       Impact factor: 5.315

8.  Voxel-based texture analysis of the brain.

Authors:  Rouzbeh Maani; Yee Hong Yang; Sanjay Kalra
Journal:  PLoS One       Date:  2015-03-10       Impact factor: 3.240

9.  Responsible Radiomics Research for Faster Clinical Translation.

Authors:  Martin Vallières; Alex Zwanenburg; Bodgan Badic; Catherine Cheze Le Rest; Dimitris Visvikis; Mathieu Hatt
Journal:  J Nucl Med       Date:  2017-11-24       Impact factor: 10.057

10.  Effect of slice thickness on brain magnetic resonance image texture analysis.

Authors:  Sami J Savio; Lara C V Harrison; Tiina Luukkaala; Tomi Heinonen; Prasun Dastidar; Seppo Soimakallio; Hannu J Eskola
Journal:  Biomed Eng Online       Date:  2010-10-18       Impact factor: 2.819

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