Literature DB >> 19470454

Natural selection and phylogenetic analysis.

Scott V Edwards1.   

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Year:  2009        PMID： 19470454      PMCID： PMC2690041          DOI： 10.1073/pnas.0904103106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


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  12 in total

1.  The phylogeny of closely related species as revealed by the genealogy of a speciation gene, Odysseus.

Authors:  C T Ting; S C Tsaur; C I Wu
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-09       Impact factor: 11.205

2.  Performance of maximum parsimony and likelihood phylogenetics when evolution is heterogeneous.

Authors:  Bryan Kolaczkowski; Joseph W Thornton
Journal:  Nature       Date:  2004-10-21       Impact factor: 49.962

3.  An empirical assessment of long-branch attraction artefacts in deep eukaryotic phylogenomics.

Authors:  Henner Brinkmann; Mark van der Giezen; Yan Zhou; Gaëtan Poncelin de Raucourt; Hervé Philippe
Journal:  Syst Biol       Date:  2005-10       Impact factor: 15.683

4.  An improved statistical method for detecting heterotachy in nucleotide sequences.

Authors:  Guy Baele; Jeroen Raes; Yves Van de Peer; Stijn Vansteelandt
Journal:  Mol Biol Evol       Date:  2006-05-03       Impact factor: 16.240

5.  Base-compositional heterogeneity in the RAG1 locus among didelphid marsupials: implications for phylogenetic inference and the evolution of GC content.

Authors:  Karl F Gruber; Robert S Voss; Sharon A Jansa
Journal:  Syst Biol       Date:  2007-02       Impact factor: 15.683

6.  Molecular clock: an anti-neo-Darwinian legacy.

Authors:  Naoyuki Takahata
Journal:  Genetics       Date:  2007-05       Impact factor: 4.562

7.  Evidence for an ancient adaptive episode of convergent molecular evolution.

Authors:  Todd A Castoe; A P Jason de Koning; Hyun-Min Kim; Wanjun Gu; Brice P Noonan; Gavin Naylor; Zhi J Jiang; Christopher L Parkinson; David D Pollock
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-28       Impact factor: 11.205

8.  Adaptive evolution in the stomach lysozymes of foregut fermenters.

Authors:  C B Stewart; J W Schilling; A C Wilson
Journal:  Nature       Date:  1987 Nov 26-Dec 2       Impact factor: 49.962

Review 9.  The molecular descent of the major histocompatibility complex.

Authors:  J Klein; Y Satta; C O'hUigin; N Takahata
Journal:  Annu Rev Immunol       Date:  1993       Impact factor: 28.527

10.  Heterotachy and long-branch attraction in phylogenetics.

Authors:  Hervé Philippe; Yan Zhou; Henner Brinkmann; Nicolas Rodrigue; Frédéric Delsuc
Journal:  BMC Evol Biol       Date:  2005-10-06       Impact factor: 3.260
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  15 in total

1.  Error, signal, and the placement of Ctenophora sister to all other animals.

Authors:  Nathan V Whelan; Kevin M Kocot; Leonid L Moroz; Kenneth M Halanych
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-20       Impact factor: 11.205

2.  Microsatellite polymorphism in the sexually transmitted human pathogen Trichomonas vaginalis indicates a genetically diverse parasite.

Authors:  Melissa Conrad; Zuzana Zubacova; Linda A Dunn; Jacqui Upcroft; Steven A Sullivan; Jan Tachezy; Jane M Carlton
Journal:  Mol Biochem Parasitol       Date:  2010-09-09       Impact factor: 1.759

3.  Episodic evolution of coadapted sets of amino acid sites in mitochondrial proteins.

Authors:  Alexey D Neverov; Anfisa V Popova; Gennady G Fedonin; Evgeny A Cheremukhin; Galya V Klink; Georgii A Bazykin
Journal:  PLoS Genet       Date:  2021-01-25       Impact factor: 5.917

4.  Concordance and discordance of sequence survey methods for molecular epidemiology.

Authors:  Eduardo Castro-Nallar; Nur A Hasan; Thomas A Cebula; Rita R Colwell; Richard A Robison; W Evan Johnson; Keith A Crandall
Journal:  PeerJ       Date:  2015-02-17       Impact factor: 2.984

5.  Contrasted evolutionary histories of two Toll-like receptors (Tlr4 and Tlr7) in wild rodents (MURINAE).

Authors:  Alena Fornůsková; Michal Vinkler; Marie Pagès; Maxime Galan; Emmanuelle Jousselin; Frederique Cerqueira; Serge Morand; Nathalie Charbonnel; Josef Bryja; Jean-François Cosson
Journal:  BMC Evol Biol       Date:  2013-09-12       Impact factor: 3.260

6.  Secondary structure analyses of the nuclear rRNA internal transcribed spacers and assessment of its phylogenetic utility across the Brassicaceae (mustards).

Authors:  Patrick P Edger; Michelle Tang; Kevin A Bird; Dustin R Mayfield; Gavin Conant; Klaus Mummenhoff; Marcus A Koch; J Chris Pires
Journal:  PLoS One       Date:  2014-07-01       Impact factor: 3.240

7.  Incomplete Lineage Sorting and Hybridization Statistics for Large-Scale Retroposon Insertion Data.

Authors:  Andrej Kuritzin; Tabea Kischka; Jürgen Schmitz; Gennady Churakov
Journal:  PLoS Comput Biol       Date:  2016-03-11       Impact factor: 4.475

8.  Comparative Analysis of the Chloroplast Genomic Information of Cunninghamia lanceolata (Lamb.) Hook with Sibling Species from the Genera Cryptomeria D. Don, Taiwania Hayata, and Calocedrus Kurz.

Authors:  Weiwei Zheng; Jinhui Chen; Zhaodong Hao; Jisen Shi
Journal:  Int J Mol Sci       Date:  2016-07-07       Impact factor: 5.923

9.  Does the virus cross the road? Viral phylogeographic patterns among bobcat populations reflect a history of urban development.

Authors:  Christopher P Kozakiewicz; Christopher P Burridge; W Chris Funk; Meggan E Craft; Kevin R Crooks; Robert N Fisher; Nicholas M Fountain-Jones; Megan K Jennings; Simona J Kraberger; Justin S Lee; Lisa M Lyren; Seth P D Riley; Laurel E K Serieys; Sue VandeWoude; Scott Carver
Journal:  Evol Appl       Date:  2020-02-20       Impact factor: 5.183

10.  Genetic Adaptations of an Island Pit-Viper to a Unique Sedentary Life with Extreme Seasonal Food Availability.

Authors:  Bin Lu; Xiaoping Wang; Jinzhong Fu; Jingsong Shi; Yayong Wu; Yin Qi
Journal:  G3 (Bethesda)       Date:  2020-05-04       Impact factor: 3.154
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