Literature DB >> 19457428

Rapid and high-throughput analysis of N-glycans from ovarian cancer serum using a 96-well plate platform.

Yun-Gon Kim1, Hee-Jin Jeong, Kyoung-Soon Jang, Yung-Hun Yang, Yong-Sang Song, Junho Chung, Byung-Gee Kim.   

Abstract

We present a rapid and high-throughput human serum N-glycan preparation technology using 96-well plate-based procedures. The released N-glycans from polyvinylidene fluoride (PVDF) membrane filter plate are subsequently loaded to porous graphitic carbon (PGC) containing a 96-well plate to remove salts and other contaminants without sacrificing accuracy or reproducibility. This robust glycan preparation technology is applied to ovarian cancer diagnosis using 5 microl of patient serum.

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Year:  2009        PMID： 19457428     DOI： 10.1016/j.ab.2009.05.015

Source DB:  PubMed          Journal:  Anal Biochem        ISSN： 0003-2697            Impact factor:   3.365


  12 in total

1.  A novel method for relative quantitation of N-glycans by isotopic labeling using ¹⁸O-water.

Authors:  Shujuan Tao; Ron Orlando
Journal:  J Biomol Tech       Date:  2014-12

Review 2.  Analysis of carbohydrates and glycoconjugates by matrix-assisted laser desorption/ionization mass spectrometry: an update for 2009-2010.

Authors:  David J Harvey
Journal:  Mass Spectrom Rev       Date:  2014-05-26       Impact factor: 10.946

3.  Improving N-glycan coverage using HPLC-MS with electrospray ionization at subambient pressure.

Authors:  Ioan Marginean; Scott R Kronewitter; Ronald J Moore; Gordon W Slysz; Matthew E Monroe; Gordon Anderson; Keqi Tang; Richard D Smith
Journal:  Anal Chem       Date:  2012-10-17       Impact factor: 6.986

4.  Mass spectrometric assay for analysis of haptoglobin fucosylation in pancreatic cancer.

Authors:  Zhenxin Lin; Diane M Simeone; Michelle A Anderson; Randall E Brand; Xiaolei Xie; Kerby A Shedden; Mack T Ruffin; David M Lubman
Journal:  J Proteome Res       Date:  2011-03-31       Impact factor: 4.466

5.  The use of underloaded C(18) solid-phase extraction plates increases reproducibility of analysis of tryptic peptides from unfractionated human plasma.

Authors:  Xiaofeng Guo; Bruce S Kristal
Journal:  Anal Biochem       Date:  2012-04-07       Impact factor: 3.365

6.  Serum glycan signatures of gastric cancer.

Authors:  Sureyya Ozcan; Donald A Barkauskas; L Renee Ruhaak; Javier Torres; Cara L Cooke; Hyun Joo An; Serenus Hua; Cynthia C Williams; Lauren M Dimapasoc; Jae Han Kim; Margarita Camorlinga-Ponce; David Rocke; Carlito B Lebrilla; Jay V Solnick
Journal:  Cancer Prev Res (Phila)       Date:  2013-12-10

7.  Evaluation of glycomic profiling as a diagnostic biomarker for epithelial ovarian cancer.

Authors:  Kyoungmi Kim; L Renee Ruhaak; Uyen Thao Nguyen; Sandra L Taylor; Lauren Dimapasoc; Cynthia Williams; Carol Stroble; Sureyya Ozcan; Suzanne Miyamoto; Carlito B Lebrilla; Gary S Leiserowitz
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2014-02-20       Impact factor: 4.254

8.  The glycolyzer: automated glycan annotation software for high performance mass spectrometry and its application to ovarian cancer glycan biomarker discovery.

Authors:  Scott R Kronewitter; Maria Lorna A De Leoz; John S Strum; Hyun Joo An; Lauren M Dimapasoc; Andrés Guerrero; Suzanne Miyamoto; Carlito B Lebrilla; Gary S Leiserowitz
Journal:  Proteomics       Date:  2012-08       Impact factor: 3.984

9.  Liquid Chromatography-Tandem Mass Spectrometry Approach for Determining Glycosidic Linkages.

Authors:  Ace G Galermo; Eshani Nandita; Mariana Barboza; Matthew J Amicucci; Thai-Thanh T Vo; Carlito B Lebrilla
Journal:  Anal Chem       Date:  2018-10-18       Impact factor: 6.986

Review 10.  Developments in the identification of glycan biomarkers for the detection of cancer.

Authors:  L Renee Ruhaak; Suzanne Miyamoto; Carlito B Lebrilla
Journal:  Mol Cell Proteomics       Date:  2013-01-30       Impact factor: 5.911
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