Literature DB >> 19453363

Proteomic identification and profiling of canine lymphoma patients.

L Ratcliffe1, S Mian, K Slater, H King, M Napolitano, D Aucoin, A Mobasheri.   

Abstract

This study employed proteomic and bioinformatic approaches to identify serum biomarkers in canine lymphoma patients. Chilled serum samples derived from non-lymphoma (n = 92) and lymphoma (n = 87) patients were shipped from first opinion veterinary practices, subjected to ion exchange chromatography and analysed by surface-enhanced laser desorption ionization mass spectrometry. Nineteen serum protein peaks were identified between the two groups as being significantly different (P < 0.05) based upon their normalized ion intensities. Two biomarkers were identified that were capable of differentiating lymphoma and non-lymphoma patients. Analysis of the test data provided a positive predictive value (PPV) of 82%. A clinical follow-up study was carried out on 96 canine patients suspected of having lymphoma. Evaluation of this data gave a specificity value of 91%, sensitivity of 75%, PPV of 80% and negative predictive value of 88%. In conclusion, the expression pattern of two serum biomarkers has enabled serum samples to be classified into either lymphoma or non-lymphoma categories.

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Year:  2009        PMID: 19453363     DOI: 10.1111/j.1476-5829.2009.00165.x

Source DB:  PubMed          Journal:  Vet Comp Oncol        ISSN: 1476-5810            Impact factor:   2.613


  10 in total

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Journal:  PLoS One       Date:  2021-08-19       Impact factor: 3.240

Review 2.  Application of machine learning to proteomics data: classification and biomarker identification in postgenomics biology.

Authors:  Anna Louise Swan; Ali Mobasheri; David Allaway; Susan Liddell; Jaume Bacardit
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Journal:  BMC Vet Res       Date:  2012-05-25       Impact factor: 2.741

Review 4.  The Current State of Clinical Application of Serum Biomarkers for Canine Lymphoma.

Authors:  Jeffrey N Bryan
Journal:  Front Vet Sci       Date:  2016-09-30

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Journal:  Int J Mol Sci       Date:  2018-02-14       Impact factor: 5.923

6.  Investigation of proteomic profiles in canine lymphoma using tandem mass tag-based quantitative proteomics approach.

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7.  Proteogenomics of selective susceptibility to endotoxin using circulating acute phase biomarkers and bioassay development in sheep: a review.

Authors:  Saul Chemonges; John-Paul Tung; John F Fraser
Journal:  Proteome Sci       Date:  2014-03-01       Impact factor: 2.480

8.  The immunosignature of canine lymphoma: characterization and diagnostic application.

Authors:  Stephen Albert Johnston; Douglas H Thamm; Joseph Barten Legutki
Journal:  BMC Cancer       Date:  2014-09-08       Impact factor: 4.430

9.  Prospective evaluation of the lymph node proteome in dogs with multicentric lymphoma supplemented with sulforaphane.

Authors:  Cyril Parachini-Winter; Shay Bracha; Stephen A Ramsey; Liping Yang; Emily Ho; Haley J Leeper; Kaitlin M Curran
Journal:  J Vet Intern Med       Date:  2020-09-14       Impact factor: 3.333

10.  Data-Independent Acquisition Enables Robust Quantification of 400 Proteins in Non-Depleted Canine Plasma.

Authors:  Halley Gora Ravuri; Zainab Noor; Paul C Mills; Nana Satake; Pawel Sadowski
Journal:  Proteomes       Date:  2022-02-28
  10 in total

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