Literature DB >> 19451123

Using food web dominator trees to catch secondary extinctions in action.

Antonio Bodini1, Michele Bellingeri, Stefano Allesina, Cristina Bondavalli.   

Abstract

In ecosystems, a single extinction event can give rise to multiple 'secondary' extinctions. Conservation effort would benefit from tools that help forecast the consequences of species removal. One such tool is the dominator tree, a graph-theoretic algorithm that when applied to food webs unfolds their complex architecture, yielding a simpler topology made of linear pathways that are essential for energy delivery. Each species along these chains is responsible for passing energy to the taxa that follow it and, as such, it is indispensable for their survival. To assess the predictive potential of the dominator tree, we compare its predictions with the effects that followed the collapse of the capelin (Mallotus villosus) in the Barents Sea ecosystem. To this end, we first compiled a food web for this ecosystem, then we built the corresponding dominator tree and, finally, we observed whether model predictions matched the empirical observations. This analysis shows the potential and the drawbacks of the dominator trees as a tool for understanding the causes and consequences of extinctions in food webs.

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Year:  2009        PMID: 19451123      PMCID: PMC2685427          DOI: 10.1098/rstb.2008.0278

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  12 in total

1.  Causes, consequences and ethics of biodiversity.

Authors:  D Tilman
Journal:  Nature       Date:  2000-05-11       Impact factor: 49.962

2.  Complexity and fragility in ecological networks.

Authors:  R V Solé; J M Montoya
Journal:  Proc Biol Sci       Date:  2001-10-07       Impact factor: 5.349

3.  Who dominates whom in the ecosystem? Energy flow bottlenecks and cascading extinctions.

Authors:  Stefano Allesina; Antonio Bodini
Journal:  J Theor Biol       Date:  2004-10-07       Impact factor: 2.691

4.  Tolerance of pollination networks to species extinctions.

Authors:  Jane Memmott; Nickolas M Waser; Mary V Price
Journal:  Proc Biol Sci       Date:  2004-12-22       Impact factor: 5.349

Review 5.  Ecological networks and their fragility.

Authors:  José M Montoya; Stuart L Pimm; Ricard V Solé
Journal:  Nature       Date:  2006-07-20       Impact factor: 49.962

6.  Food webs robustness to biodiversity loss: the roles of connectance, expansibility and degree distribution.

Authors:  Ernesto Estrada
Journal:  J Theor Biol       Date:  2006-08-12       Impact factor: 2.691

7.  Response of complex food webs to realistic extinction sequences.

Authors:  U Thara Srinivasan; Jennifer A Dunne; John Harte; Neo D Martinez
Journal:  Ecology       Date:  2007-03       Impact factor: 5.499

8.  Functional links and robustness in food webs.

Authors:  Stefano Allesina; Antonio Bodini; Mercedes Pascual
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2009-06-27       Impact factor: 6.237

9.  A general theory of environmental noise in ecological food webs.

Authors:  J Ripa; P Lundberg; V Kaitala
Journal:  Am Nat       Date:  1998-03       Impact factor: 3.926

Review 10.  Consequences of changing biodiversity.

Authors:  F S Chapin; E S Zavaleta; V T Eviner; R L Naylor; P M Vitousek; H L Reynolds; D U Hooper; S Lavorel; O E Sala; S E Hobbie; M C Mack; S Díaz
Journal:  Nature       Date:  2000-05-11       Impact factor: 49.962

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  4 in total

1.  Spatial guilds in the Serengeti food web revealed by a Bayesian group model.

Authors:  Edward B Baskerville; Andy P Dobson; Trevor Bedford; Stefano Allesina; T Michael Anderson; Mercedes Pascual
Journal:  PLoS Comput Biol       Date:  2011-12-29       Impact factor: 4.475

2.  Architecture of marine food webs: To be or not be a 'small-world'.

Authors:  Tomás Ignacio Marina; Leonardo A Saravia; Georgina Cordone; Vanesa Salinas; Santiago R Doyle; Fernando R Momo
Journal:  PLoS One       Date:  2018-05-29       Impact factor: 3.240

3.  Relaxation dynamics of generalized scale-free polymer networks.

Authors:  Aurel Jurjiu; Deuticilam Gomes Maia Júnior; Mircea Galiceanu
Journal:  Sci Rep       Date:  2018-02-27       Impact factor: 4.379

4.  ZDOG: zooming in on dominating genes with mutations in cancer pathways.

Authors:  Rudi Alberts; Jinyu Chen; Louxin Zhang
Journal:  BMC Bioinformatics       Date:  2019-12-30       Impact factor: 3.169

  4 in total

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