Literature DB >> 19447904

Novel toxin-antitoxin system composed of serine protease and AAA-ATPase homologues determines the high level of stability and incompatibility of the tumor-inducing plasmid pTiC58.

Shinji Yamamoto1, Kazuya Kiyokawa, Katsuyuki Tanaka, Kazuki Moriguchi, Katsunori Suzuki.   

Abstract

Stability of plant tumor-inducing (Ti) plasmids differs among strains. A high level of stability prevents basic and applied studies including the development of useful strains. The nopaline type Ti plasmid pTiC58 significantly reduces the transconjugant efficiency for incoming incompatible plasmids relative to the other type, such as octopine-type plasmids. In this study we identified a region that increases the incompatibility and stability of the plasmid. This region was located on a 4.3-kbp segment about 38 kbp downstream of the replication locus, repABC. We named two open reading frames in the segment, ietA and ietS, both of which were essential for the high level of incompatibility and stability. Plasmid stabilization by ietAS was accomplished by a toxin-antitoxin (TA) mechanism, where IetS is the toxin and IetA is the antitoxin. A database search revealed that putative IetA and IetS proteins are highly similar to AAA-ATPases and subtilisin-like serine proteases, respectively. Amino acid substitution experiments in each of the highly conserved characteristic residues, in both putative enzymes, suggested that the protease activity is essential and that ATP binding activity is important for the operation of the TA system. The ietAS-containing repABC plasmids expelled Ti plasmids even in strains which were tolerant to conventional Ti-curing treatments.

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Year:  2009        PMID: 19447904      PMCID: PMC2704731          DOI: 10.1128/JB.00124-09

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  34 in total

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Review 2.  Partition-mediated incompatibility of bacterial plasmids.

Authors:  S Austin; K Nordström
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Review 3.  Comparison of lantibiotic gene clusters and encoded proteins.

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Review 4.  Timing, self-control and a sense of direction are the secrets of multicopy plasmid stability.

Authors:  D Summers
Journal:  Mol Microbiol       Date:  1998-09       Impact factor: 3.501

5.  Novel structural difference between nopaline- and octopine-type trbJ genes: construction of genetic and physical map and sequencing of trb/traI and rep gene clusters of a new Ti plasmid pTi-SAKURA.

Authors:  K Suzuki; N Ohta; Y Hattori; M Uraji; A Kato; K Yoshida
Journal:  Biochim Biophys Acta       Date:  1998-03-04

Review 6.  Rolling-circle plasmids from Bacillus subtilis: complete nucleotide sequences and analyses of genes of pTA1015, pTA1040, pTA1050 and pTA1060, and comparisons with related plasmids from gram-positive bacteria.

Authors:  W J Meijer; G B Wisman; P Terpstra; P B Thorsted; C M Thomas; S Holsappel; G Venema; S Bron
Journal:  FEMS Microbiol Rev       Date:  1998-02       Impact factor: 16.408

7.  Site-directed mutagenesis by overlap extension using the polymerase chain reaction.

Authors:  S N Ho; H D Hunt; R M Horton; J K Pullen; L R Pease
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Authors:  R F Wang; E B O'Hara; M Aldea; C I Bargmann; H Gromley; S R Kushner
Journal:  J Bacteriol       Date:  1998-04       Impact factor: 3.490

10.  Broad-host-range expression vectors that carry the L-arabinose-inducible Escherichia coli araBAD promoter and the araC regulator.

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  16 in total

1.  A cooperative virulence plasmid imposes a high fitness cost under conditions that induce pathogenesis.

Authors:  Thomas G Platt; James D Bever; Clay Fuqua
Journal:  Proc Biol Sci       Date:  2011-11-23       Impact factor: 5.349

2.  The ParE2-PaaA2 toxin-antitoxin complex from Escherichia coli O157 forms a heterodocecamer in solution and in the crystal.

Authors:  Yann G J Sterckx; Abel Garcia-Pino; Sarah Haesaerts; Thomas Jové; Lieselotte Geerts; Viktor Sakellaris; Laurence Van Melderen; Remy Loris
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-05-25

3.  The Presence of the Hairy-Root-Disease-Inducing (Ri) Plasmid in Wheat Endophytic Rhizobia Explains a Pathogen Reservoir Function of Healthy Resistant Plants.

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Journal:  Appl Environ Microbiol       Date:  2020-08-18       Impact factor: 4.792

Review 4.  The Agrobacterium Ti Plasmids.

Authors:  Jay E Gordon; Peter J Christie
Journal:  Microbiol Spectr       Date:  2014-12

5.  Diverse enzymatic activities mediate antiviral immunity in prokaryotes.

Authors:  Linyi Gao; Han Altae-Tran; Francisca Böhning; Kira S Makarova; Michael Segel; Jonathan L Schmid-Burgk; Jeremy Koob; Yuri I Wolf; Eugene V Koonin; Feng Zhang
Journal:  Science       Date:  2020-08-28       Impact factor: 47.728

6.  Agrobacterium tumefaciens tumor morphology root plastid localization and preferential usage of hydroxylated prenyl donor is important for efficient gall formation.

Authors:  Nanae Ueda; Mikiko Kojima; Katsunori Suzuki; Hitoshi Sakakibara
Journal:  Plant Physiol       Date:  2012-05-15       Impact factor: 8.340

7.  A processed noncoding RNA regulates an altruistic bacterial antiviral system.

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Journal:  BMC Genomics       Date:  2011-11-23       Impact factor: 3.969

9.  Functional Characterization of the mazEF Toxin-Antitoxin System in the Pathogenic Bacterium Agrobacterium tumefaciens.

Authors:  Wonho Choi; Yoshihiro Yamaguchi; Ji-Young Park; Sang-Hyun Park; Hyeok-Won Lee; Byung-Kwan Lim; Michael Otto; Masayori Inouye; Min-Ho Yoon; Jung-Ho Park
Journal:  Microorganisms       Date:  2021-05-20

Review 10.  To be or not to be: regulation of restriction-modification systems and other toxin-antitoxin systems.

Authors:  Iwona Mruk; Ichizo Kobayashi
Journal:  Nucleic Acids Res       Date:  2013-08-13       Impact factor: 16.971

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