| Literature DB >> 19445688 |
Kyoko Aoki1, Makoto Kato, Noriaki Murakami.
Abstract
BACKGROUND: Climatic changes during glacial periods have had a major influence on the recent evolutionary history of living organisms, even in temperate forests on islands, where the land was not covered with ice sheets. We investigated the phylogeographical patterns of the weevil Curculio sikkimensis (Curculionidae), a generalist seed predator of Fagaceae plants living in both deciduous oak and evergreen forests of Japan. Its genetic structure was compared to that of another host-specific seed predator, C. hilgendorfi, inhabiting only evergreen forests.Entities:
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Year: 2009 PMID: 19445688 PMCID: PMC2691738 DOI: 10.1186/1471-2148-9-103
Source DB: PubMed Journal: BMC Evol Biol ISSN: 1471-2148 Impact factor: 3.260
Sample collection sites and host plant species of Curculio sikkimensis in Japan
| Localities | Host plants | Latitude | Longitude | No. samples | |
| 1 | Narita, Chiba | 35.47.00 | 140.19.15 | 3 | |
| 2 | Mt. Takatsuka, Chiba | 34.56.10 | 139.56.35 | 4 | |
| 3 | Higashizushi, Kanagawa | 35.18.10 | 139.36.15 | 4 | |
| 4 | Uenohara, Yamanashi | 35.37.55 | 139.06.50 | 2 | |
| 5 | Ito, Shizuoka | 34.52.35 | 139.05.45 | 2 | |
| 1 | |||||
| 6 | Minamiizu, Shizuoka | 34.39.00 | 138.51.10 | 7 | |
| 7 | Minoshima, Wakayama | 34.04.40 | 135.07.25 | 1 | |
| 8 | Kitagawa, Kochi | 33.28.50 | 134.03.25 | 2 | |
| 9 | Monobe, Kochi | 33.48.15 | 133.53.40 | 6 | |
| 10 | Nangoku, Kochi | 33.37.10 | 133.35.40 | 2 | |
| 11 | Kochi, Kochi | 33.33.02 | 133.28.50 | 2 | |
| 12 | Susaki, Kochi | 33.24.55 | 133.18.35 | 1 | |
| 13 | Himesaki, Sado Is., Niigata | 38.05.05 | 138.33.45 | 1 | |
| 14 | Futami, Sado Is., Niigata | 37.58.45 | 138.15.25 | 2 | |
| 15 | Hikone, Shiga | 35.17.05 | 136.16.00 | 1 | |
| 16 | Mt. Hira, Shiga | 35.12.50 | 135.53.35 | 5 | |
| 17 | Higashiyama, Kyoto | 35.00.10 | 135.47.15 | 4 | |
| 1 | |||||
| 18 | Yoshida, Kyoto | 35.01.35 | 135.47.05 | 4 | |
| 2 | |||||
| 1 | |||||
| 19 | Fushimi, Kyoto | 34.58.05 | 135.46.55 | 1 | |
| 20 | Kasuga, Nara | 34.40.40 | 135.51.25 | 4 | |
| 2 | |||||
| 21 | Oki Is., Shimane | 36.10.35 | 133.18.10 | 4 | |
| 22 | Matsue, Shimane | 35.28.55 | 133.03.05 | 2 | |
| 23 | Ooda, Shimane | 35.11.55 | 132.28.05 | 4 | |
| 24 | Kanayama, Okayama | 34.44.20 | 133.56.45 | 2 | |
| 25 | Kojima, Okayama | 34.30.20 | 133.50.55 | 1 | |
| 26 | Niho, Yamaguchi | 34.12.60 | 131.32.45 | 4 | |
| 2 | |||||
| 27 | Ogori, Yamaguchi | 34.06.35 | 131.23.55 | 2 | |
| 28 | Kashii, Fukuoka | 33.39.10 | 130.27.10 | 2 | |
| 29 | Kasuga, Fukuoka | 33.31.20 | 130.28.10 | 3 | |
| 30 | Nobeoka, Miyazaki | 32.37.15 | 131.34.35 | 3 | |
| 31 | Aya, Miyazaki | 32.01.40 | 131.10.10 | 8 | |
| 5 | |||||
| 3 | |||||
| 1 | |||||
| 32 | Issou, Yaku Is., Kagoshima | 30.27.15 | 130.29.10 | 3 | |
| 33 | Hanyama, Yaku Is., Kagoshima | 30.22.10 | 130.23.05 | 1 |
Polymorphism summary statistics based on 921 bp of Curculio sikkimensis mtDNA
| No. samples | No. haplotypes | Haplotype diversity ( | Nucleotide diversity (π) | Tajima's |
| 115 | 41 | 0.9333 | 0.004654 | -1.60560 |
Figure 1Geographic distribution of mtDNA haplotypes of . (a) Geographic distribution of 41 mtDNA haplotypes found among 115 individuals of the generalist seed parasitic weevil, C. sikkimensis. Sample size ranged from 1 to 17 individuals per population. Circle sizes are proportional to haplotype frequencies. See Table 1 for the exact locations of populations and host plant species. (b) Relatedness among haplotypes detected in 921 bp of mtDNA (COI) of C. sikkimensis, represented in a statistical parsimony haplotype network. Each haplotype indicates the proportion of a host plant genus. Circle sizes are proportional to haplotype frequencies, and open dots indicate missing intermediate haplotypes.
Analysis of molecular variance (AMOVA) of genetic variation in 921 bp of mtDNA of Curculio sikkimensis
| Grouping criteria and source of variation | df | Sum of squares | Variance components | % of total variation | Φ statistics with |
| Among groups | 1 | 91.7 | 1.56 | 52.8 | ΦCT = 0.52 |
| Among populations within groups | 31 | 64.5 | 0.29 | 10.0 | ( |
| Within populations | 82 | 89.6 | 1.09 | 37.0 | |
| Total | 114 | 245.9 | 2.95 | ||
| Among groups | 2 | 103.1 | 1.32 | 50.3 | ΦCT = 0.50 |
| Among populations within groups | 30 | 53.2 | 0.21 | 8.1 | ( |
| Within populations | 82 | 89.6 | 1.09 | 41.5 | |
| Total | 114 | 245.9 | 2.62 | ||
| Among groups | 1 | 4.0 | -0.07 | -3.3 | ΦCT = -0.03 |
| Among populations within groups | 38 | 157.6 | 1.09 | 51.0 | ( |
| Within populations | 75 | 84.2 | 1.12 | 52.3 | |
| Total | 114 | 245.9 | 2.14 | ||
| Among groups | 3 | 25.5 | 0.15 | 6.8 | ΦCT = 0.06 |
| Among populations within groups | 36 | 136.0 | 0.97 | 43.2 | ( |
| Within populations | 75 | 84.2 | 1.12 | 49.8 | |
| Total | 114 | 245.9 | 2.25 | ||
Groupings of populations were examined based on their geographic distributions and host plants.
Figure 2Geographic distribution of mtDNA haplotypes of [24]). (a) Geographic distribution of 102 mtDNA haplotypes found among 189 individuals of the host-specific seed parasitic weevil C. hilgendorfi on the main islands of Japan. (b) Relatedness among haplotypes detected in 2709 bp of mtDNA (COI, COII, and ND5) of C. hilgendorfi, represented in a statistical parsimony haplotype network. The values of haplotype diversity and nucleotide diversity of NE and SW clades are 0.964 and 0.00385, respectively.
Figure 3Sizes and shapes of the acorns used by . The acorns and weevils have been drawn at an approximate scale of 1:2.