Literature DB >> 19443928

A new distance measure for model-based sequence clustering.

Darío García-García1, Emilio Parrado Hernández, Fernando Díaz-de María.   

Abstract

We review the existing alternatives for defining model-based distances for clustering sequences and propose a new one based on the Kullback-Leibler divergence. This distance is shown to be especially useful in combination with spectral clustering. For improved performance in real-world scenarios, a model selection scheme is also proposed.

Mesh:

Year:  2009        PMID: 19443928     DOI: 10.1109/TPAMI.2008.268

Source DB:  PubMed          Journal:  IEEE Trans Pattern Anal Mach Intell        ISSN: 0098-5589            Impact factor:   6.226


  5 in total

1.  Using sequence clustering to identify clinically relevant subphenotypes in patients with COVID-19 admitted to the intensive care unit.

Authors:  Wonsuk Oh; Pushkala Jayaraman; Ashwin S Sawant; Lili Chan; Matthew A Levin; Alexander W Charney; Patricia Kovatch; Benjamin S Glicksberg; Girish N Nadkarni
Journal:  J Am Med Inform Assoc       Date:  2022-01-29       Impact factor: 4.497

2.  ARTEMIS: A Novel Mass-Spec Platform for HLA-Restricted Self and Disease-Associated Peptide Discovery.

Authors:  Kathryn A K Finton; Mi-Youn Brusniak; Lisa A Jones; Chenwei Lin; Andrew J Fioré-Gartland; Chance Brock; Philip R Gafken; Roland K Strong
Journal:  Front Immunol       Date:  2021-04-23       Impact factor: 7.561

3.  Abnormal Activity Detection Using Pyroelectric Infrared Sensors.

Authors:  Xiaomu Luo; Huoyuan Tan; Qiuju Guan; Tong Liu; Hankz Hankui Zhuo; Baihua Shen
Journal:  Sensors (Basel)       Date:  2016-06-03       Impact factor: 3.576

4.  Detection of Partial Discharge Sources Using UHF Sensors and Blind Signal Separation.

Authors:  Carlos Boya; Guillermo Robles; Emilio Parrado-Hernández; Marta Ruiz-Llata
Journal:  Sensors (Basel)       Date:  2017-11-15       Impact factor: 3.576

5.  Clustering multivariate time series using Hidden Markov Models.

Authors:  Shima Ghassempour; Federico Girosi; Anthony Maeder
Journal:  Int J Environ Res Public Health       Date:  2014-03-06       Impact factor: 3.390

  5 in total

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