Literature DB >> 19431888

Molecular dynamics study of the lauryl alcohol-laurate model bilayer.

T Fukada1, S Okazaki, I Okada.   

Abstract

Molecular dynamics (MD) calculation of the fluid phase lauryl alcohol-laurate bilayer has been executed based on Berendsen's surface-constrained model. Structure and dynamics of the bilayer have been investigated by analyzing the trajectories of the chain configurations. Newly defined correlation functions as well as the conventional ones showed that the tilt and bend of the chain play an important role in the bilayer structure, including behavior of the order parameter. Interpenetration of the layers as well as formation of collectively ordered small domains was also found. The calculated lateral diffusion coefficient was in satisfactory agreement with the experimental one. Successive jumps of the head group, rather than the hydrodynamic continuous motion, were observed. Between the jumps, the molecule librated in a local site. Time-dependent autocorrelation functions showed evidence of several different modes of the chain motion, whose time constant ranged from a few tenths of picoseconds to several tens of picoseconds.

Entities:  

Year:  1993        PMID: 19431888      PMCID: PMC1262452          DOI: 10.1016/S0006-3495(93)81464-4

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  12 in total

Review 1.  Deuterium magnetic resonance: theory and application to lipid membranes.

Authors:  J Seelig
Journal:  Q Rev Biophys       Date:  1977-08       Impact factor: 5.318

2.  Two pictures of a lipid bilayer. A comparison between deuterium label and spin-label experiments.

Authors:  J Seelig; W Niederberger
Journal:  Biochemistry       Date:  1974-04-09       Impact factor: 3.162

3.  Chain ordering in liquid crystals. II. Structure of bilayer membranes.

Authors:  S Marcelja
Journal:  Biochim Biophys Acta       Date:  1974-10-29

4.  Minimization of polypeptide energy. I. Preliminary structures of bovine pancreatic ribonuclease S-peptide.

Authors:  K D Gibson; H A Scheraga
Journal:  Proc Natl Acad Sci U S A       Date:  1967-08       Impact factor: 11.205

5.  A statistical mechanical model of the lipid bilayer above its phase transition.

Authors:  D W Gruen
Journal:  Biochim Biophys Acta       Date:  1980-01-25

6.  Characterization of the pretransition in 1,2-dipalmitoyl-sn-glycero-3-phosphocholine by Fourier transform infrared spectroscopy.

Authors:  D G Cameron; H L Casal; H H Mantsch
Journal:  Biochemistry       Date:  1980-08-05       Impact factor: 3.162

7.  Calcium, tropomyosin, and actomyosin as controls of calcium binding by troponin.

Authors:  C R Honig; Y S Reddy
Journal:  Recent Adv Stud Cardiac Struct Metab       Date:  1975

Review 8.  Lipid intermolecular hydrogen bonding: influence on structural organization and membrane function.

Authors:  J M Boggs
Journal:  Biochim Biophys Acta       Date:  1987-10-05

9.  Direct determination of the calcium profile structure for dipalmitoyllecithin multilayers using neutron diffraction.

Authors:  L Herbette; C A Napolitano; R V McDaniel
Journal:  Biophys J       Date:  1984-12       Impact factor: 4.033

10.  A statistical mechanical treatment of fatty acyl chain order in phospholipid bilayers and correlation with experimental data. B. Dipalmitoyl-3-sn-phosphatidylcholine.

Authors:  J P Meraldi; J Schlitter
Journal:  Biochim Biophys Acta       Date:  1981-07-20
View more
  2 in total

1.  Head group and chain behavior in biological membranes: a molecular dynamics computer simulation.

Authors:  A J Robinson; W G Richards; P J Thomas; M M Hann
Journal:  Biophys J       Date:  1994-12       Impact factor: 4.033

2.  Behavior of cholesterol and its effect on head group and chain conformations in lipid bilayers: a molecular dynamics study.

Authors:  A J Robinson; W G Richards; P J Thomas; M M Hann
Journal:  Biophys J       Date:  1995-01       Impact factor: 4.033

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.