Literature DB >> 19431723

Distributed kinetics of the charge movements in bacteriorhodopsin: evidence for conformational substates.

M Holz, M Lindau, M P Heyn.   

Abstract

The flash-induced charge movements during the photocycle of light-adapted bacteriorhodopsin in purple membranes attached to a black lipid membrane were investigated under voltage clamp and current clamp conditions. Signal registration ranged from 200 ns to 30 s after flash excitation using a logarithmic clock, allowing the equally weighted measurement of the electrical phenomena over eight decades of time. The active pumping signals were separated from the passive system discharge on the basis of an equivalent circuit analysis. Both measuring methods were shown to yield equivalent results, but the charge translocation could be accurately monitored over the whole time range only under current clamp conditions. To describe the time course of the photovoltage signals a model based on distributed kinetics was found to be more appropriate than discrete first order processes suggesting the existence of conformational substates with distributed activation energies. The time course of the active charge displacement is characterised by a continuous relaxation time spectrum with three broad peaks plus an unresolved fast transient (<0.3 mus) of opposite polarity. The time constants and relative amplitudes (in brackets) derived from the peak rate constants and relative areas of the three bands are: tau(1) = 32 mus (20%), tau(2) = 0.89 ms (15%) and tau(3) = 18 ms (65%) at 25 degrees C in 150 mM KCl at pH7. The Arrhenius plots of the peak rate constants were linear yielding activation energies of E(A1) = 57 kJ/mol, E(A2) = 52 kJ/mol, and E(A3) = 44 kJ/mol. The electrical signal at 890 mus has no counterpart in the photocycle of bacteriorhodopsin suspensions. Fits with a sum of exponentials required 5 to 6 components and were not reproducible. Analysis of photoelectrical signals with continuous relaxation time spectra gave equally good fits with fewer parameters and were well reproducible.

Entities:  

Year:  1988        PMID: 19431723      PMCID: PMC1330235          DOI: 10.1016/S0006-3495(88)83141-2

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  19 in total

1.  A Fourier method for the analysis of exponential decay curves.

Authors:  S W Provencher
Journal:  Biophys J       Date:  1976-01       Impact factor: 4.033

2.  How Many M Forms are there in the Bacteriorhodopsin Photocycle?

Authors:  G I Groma; Z Dancshazy
Journal:  Biophys J       Date:  1986-08       Impact factor: 4.033

3.  Time resolution of the intermediate steps in the bacteriorhodopsin-linked electrogenesis.

Authors:  L A Drachev; A D Kaulen; V P Skulachev
Journal:  FEBS Lett       Date:  1978-03-01       Impact factor: 4.124

4.  Interpretation of fluorescence decays in proteins using continuous lifetime distributions.

Authors:  J R Alcala; E Gratton; F G Prendergast
Journal:  Biophys J       Date:  1987-06       Impact factor: 4.033

5.  Fluorescence lifetime distributions in proteins.

Authors:  J R Alcala; E Gratton; F G Prendergast
Journal:  Biophys J       Date:  1987-04       Impact factor: 4.033

6.  Conformational changes in bacteriorhodopsin studied by infrared attenuated total reflection.

Authors:  H Marrero; K J Rothschild
Journal:  Biophys J       Date:  1987-10       Impact factor: 4.033

7.  Evidence that charge motion within bacteriorhodopsin depends on solvent viscosity.

Authors:  G W Rayfield
Journal:  Photochem Photobiol       Date:  1986-02       Impact factor: 3.421

8.  Direct analysis of continuous relaxation spectra.

Authors:  S W Provencher; V G Dovi
Journal:  J Biochem Biophys Methods       Date:  1979-12

9.  Flash-induced volume changes of bacteriorhodopsin-containing membrane fragments and their relationship to proton movements and absorbance transients.

Authors:  D R Ort; W W Parson
Journal:  J Biol Chem       Date:  1978-09-10       Impact factor: 5.157

10.  Dynamics of ligand binding to myoglobin.

Authors:  R H Austin; K W Beeson; L Eisenstein; H Frauenfelder; I C Gunsalus
Journal:  Biochemistry       Date:  1975-12-02       Impact factor: 3.162

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  21 in total

1.  Charge motions during the photocycle of pharaonis halorhodopsin.

Authors:  K Ludmann; G Ibron; J K Lanyi; G Váró
Journal:  Biophys J       Date:  2000-02       Impact factor: 4.033

2.  Characterization of the proton-transporting photocycle of pharaonis halorhodopsin.

Authors:  A Kulcsár; G I Groma; J K Lanyi; G Váró
Journal:  Biophys J       Date:  2000-11       Impact factor: 4.033

3.  Electrostatic coupling of ion pumps.

Authors:  J Nieto-Frausto; P Lüger; H J Apell
Journal:  Biophys J       Date:  1992-01       Impact factor: 4.033

4.  Imaging the membrane protein bacteriorhodopsin with the atomic force microscope.

Authors:  H J Butt; K H Downing; P K Hansma
Journal:  Biophys J       Date:  1990-12       Impact factor: 4.033

5.  Protein dynamics in the bacteriorhodopsin photocycle: submillisecond Fourier transform infrared spectra of the L, M, and N photointermediates.

Authors:  M S Braiman; O Bousché; K J Rothschild
Journal:  Proc Natl Acad Sci U S A       Date:  1991-03-15       Impact factor: 11.205

6.  Reversible steps in the bacteriorhodopsin photocycle.

Authors:  R H Lozier; A Xie; J Hofrichter; G M Clore
Journal:  Proc Natl Acad Sci U S A       Date:  1992-04-15       Impact factor: 11.205

7.  Bacteriorhodopsin photocycle at cryogenic temperatures reveals distributed barriers of conformational substates.

Authors:  Andrei K Dioumaev; Janos K Lanyi
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-29       Impact factor: 11.205

8.  Temperature jump study of charge translocation during the bacteriorhodopsin photocycle.

Authors:  H J Butt; K Fendler; A Dér; E Bamberg
Journal:  Biophys J       Date:  1989-11       Impact factor: 4.033

9.  Influence of an electrical potential on the charge transfer kinetics of bacteriorhodopsin.

Authors:  C Kleinschmidt; B Hess
Journal:  Biophys J       Date:  1990-09       Impact factor: 4.033

10.  Aspartic acid-96 is the internal proton donor in the reprotonation of the Schiff base of bacteriorhodopsin.

Authors:  H Otto; T Marti; M Holz; T Mogi; M Lindau; H G Khorana; M P Heyn
Journal:  Proc Natl Acad Sci U S A       Date:  1989-12       Impact factor: 11.205

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