Literature DB >> 19427462

A Backward Variable Selection method for PLS regression (BVSPLS).

Juan Antonio Fernández Pierna1, Ouissam Abbas, Vincent Baeten, Pierre Dardenne.   

Abstract

Variable selection has been discussed in many papers and it became an important topic in areas as chemometrics and science in general. Here a backward iterative step-by-step wrapper method is proposed using PLS. The root-mean-square error of prediction (RMSEP) for an independent test set is used as selection criterion to quantify the gain obtained using the selected range of variables. The method has been applied to different data sets and the results obtained revealed that one can improve or at least keep constant the prediction performances of the PLS models compared to the full-spectrum models. Moreover with the advantage that the number of variables is reduced driving to an easier interpretation of the relationship between model and sample composition and/or properties. The aim is not to compare to other variable selection methods but to show that a simple one can improve or at least keep constant the prediction performances of the PLS models by using only a limited number of variables.

Entities:  

Year:  2008        PMID: 19427462     DOI: 10.1016/j.aca.2008.12.002

Source DB:  PubMed          Journal:  Anal Chim Acta        ISSN: 0003-2670            Impact factor:   6.558


  3 in total

1.  Combining NMR and LC/MS Using Backward Variable Elimination: Metabolomics Analysis of Colorectal Cancer, Polyps, and Healthy Controls.

Authors:  Lingli Deng; Haiwei Gu; Jiangjiang Zhu; G A Nagana Gowda; Danijel Djukovic; E Gabriela Chiorean; Daniel Raftery
Journal:  Anal Chem       Date:  2016-08-01       Impact factor: 6.986

2.  A Partial Least Squares based algorithm for parsimonious variable selection.

Authors:  Tahir Mehmood; Harald Martens; Solve Sæbø; Jonas Warringer; Lars Snipen
Journal:  Algorithms Mol Biol       Date:  2011-12-05       Impact factor: 1.405

3.  Non-Invasive Detection of Protein Content in Several Types of Plant Feed Materials Using a Hybrid Near Infrared Spectroscopy Model.

Authors:  Xia Fan; Shichuan Tang; Guozhen Li; Xingfan Zhou
Journal:  PLoS One       Date:  2016-09-26       Impact factor: 3.240

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.