Literature DB >> 19426744

The X-ray crystal structure of the phage lambda tail terminator protein reveals the biologically relevant hexameric ring structure and demonstrates a conserved mechanism of tail termination among diverse long-tailed phages.

Lisa G Pell1, Amanda Liu, Lizbeth Edmonds, Logan W Donaldson, P Lynne Howell, Alan R Davidson.   

Abstract

The tail terminator protein (TrP) plays an essential role in phage tail assembly by capping the rapidly polymerizing tail once it has reached its requisite length and serving as the interaction surface for phage heads. Here, we present the 2.7-A crystal structure of a hexameric ring of gpU, the TrP of phage lambda. Using sequence alignment analysis and site-directed mutagenesis, we have shown that this multimeric structure is biologically relevant and we have delineated its functional surfaces. Comparison of the hexameric crystal structure with the solution structure of gpU that we previously solved using NMR spectroscopy shows large structural changes occurring upon multimerization and suggests a mechanism that allows gpU to remain monomeric at high concentrations on its own, yet polymerize readily upon contact with an assembled tail tube. The gpU hexamer displays several flexible loops that play key roles in head and tail binding, implying a role for disorder-to-order transitions in controlling assembly as has been observed with other lambda morphogenetic proteins. Finally, we have found that the hexameric structure of gpU is very similar to the structure of a putative TrP from a contractile phage tail even though it displays no detectable sequence similarity. This finding coupled with further bioinformatic investigations has led us to conclude that the TrPs of non-contractile-tailed phages, such as lambda, are evolutionarily related to those of contractile-tailed phages, such as P2 and Mu, and that all long-tailed phages may utilize a conserved mechanism for tail termination.

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Year:  2009        PMID: 19426744     DOI: 10.1016/j.jmb.2009.04.072

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  26 in total

1.  Crystal structure of bacteriophage SPP1 distal tail protein (gp19.1): a baseplate hub paradigm in gram-positive infecting phages.

Authors:  David Veesler; Gautier Robin; Julie Lichière; Isabelle Auzat; Paulo Tavares; Patrick Bron; Valérie Campanacci; Christian Cambillau
Journal:  J Biol Chem       Date:  2010-09-15       Impact factor: 5.157

2.  Phages have adapted the same protein fold to fulfill multiple functions in virion assembly.

Authors:  Lia Cardarelli; Lisa G Pell; Philipp Neudecker; Nawaz Pirani; Amanda Liu; Lindsay A Baker; John L Rubinstein; Karen L Maxwell; Alan R Davidson
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-26       Impact factor: 11.205

3.  Crystal structure of pb9, the distal tail protein of bacteriophage T5: a conserved structural motif among all siphophages.

Authors:  Ali Flayhan; Frédéric M D Vellieux; Rudi Lurz; Olivier Maury; Carlos Contreras-Martel; Eric Girard; Pascale Boulanger; Cécile Breyton
Journal:  J Virol       Date:  2013-10-23       Impact factor: 5.103

4.  Structural investigations of a Podoviridae streptococcus phage C1, implications for the mechanism of viral entry.

Authors:  Anastasia A Aksyuk; Valorie D Bowman; Bärbel Kaufmann; Christopher Fields; Thomas Klose; Heather A Holdaway; Vincent A Fischetti; Michael G Rossmann
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-13       Impact factor: 11.205

5.  The opening of the SPP1 bacteriophage tail, a prevalent mechanism in Gram-positive-infecting siphophages.

Authors:  Adeline Goulet; Joséphine Lai-Kee-Him; David Veesler; Isabelle Auzat; Gautier Robin; Dale A Shepherd; Alison E Ashcroft; Eric Richard; Julie Lichière; Paulo Tavares; Christian Cambillau; Patrick Bron
Journal:  J Biol Chem       Date:  2011-05-26       Impact factor: 5.157

6.  NMR structure of the Bordetella bronchiseptica protein NP_888769.1 establishes a new phage-related protein family PF13554.

Authors:  Pedro Serrano; Michael Geralt; Kurt Wüthrich
Journal:  Protein Sci       Date:  2011-06-14       Impact factor: 6.725

Review 7.  A common evolutionary origin for tailed-bacteriophage functional modules and bacterial machineries.

Authors:  David Veesler; Christian Cambillau
Journal:  Microbiol Mol Biol Rev       Date:  2011-09       Impact factor: 11.056

8.  The molecular architecture of the bacteriophage T4 neck.

Authors:  Andrei Fokine; Zhihong Zhang; Shuji Kanamaru; Valorie D Bowman; Anastasia A Aksyuk; Fumio Arisaka; Venigalla B Rao; Michael G Rossmann
Journal:  J Mol Biol       Date:  2013-02-19       Impact factor: 5.469

Review 9.  Molecular architecture of tailed double-stranded DNA phages.

Authors:  Andrei Fokine; Michael G Rossmann
Journal:  Bacteriophage       Date:  2014-02-21

Review 10.  Bacteriophage protein-protein interactions.

Authors:  Roman Häuser; Sonja Blasche; Terje Dokland; Elisabeth Haggård-Ljungquist; Albrecht von Brunn; Margarita Salas; Sherwood Casjens; Ian Molineux; Peter Uetz
Journal:  Adv Virus Res       Date:  2012       Impact factor: 9.937

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