Literature DB >> 19422834

Vimentin coil 1A-A molecular switch involved in the initiation of filament elongation.

Markus Meier1, G Pauline Padilla, Harald Herrmann, Tatjana Wedig, Michaela Hergt, Trushar R Patel, Jörg Stetefeld, Ueli Aebi, Peter Burkhard.   

Abstract

Interestingly, our previously published structure of the coil 1A fragment of the human intermediate filament protein vimentin turned out to be a monomeric alpha-helical coil instead of the expected dimeric coiled coil. However, the 39-amino-acid-long helix had an intrinsic curvature compatible with a coiled coil. We have now designed four mutants of vimentin coil 1A, modifying key a and d positions in the heptad repeat pattern, with the aim of investigating the molecular criteria that are needed to stabilize a dimeric coiled-coil structure. We have analysed the biophysical properties of the mutants by circular dichroism spectroscopy, analytical ultracentrifugation and X-ray crystallography. All four mutants exhibited an increased stability over the wild type as indicated by a rise in the melting temperature (T(m)). At a concentration of 0.1 mg/ml, the T(m) of the peptide with the single point mutation Y117L increased dramatically by 46 degrees C compared with the wild-type peptide. In general, the introduction of a single stabilizing point mutation at an a or a d position did induce the formation of a stable dimer as demonstrated by sedimentation equilibrium experiments. The dimeric oligomerisation state of the Y117L peptide was furthermore confirmed by X-ray crystallography, which yielded a structure with a genuine coiled-coil geometry. Most notably, when this mutation was introduced into full-length vimentin, filament assembly was completely arrested at the unit-length filament (ULF) level, both in vitro and in cDNA-transfected cultured cells. Therefore, the low propensity of the wild-type coil 1A to form a stable two-stranded coiled coil is most likely a prerequisite for the end-to-end annealing of ULFs into filaments. Accordingly, the coil 1A domains might "switch" from a dimeric alpha-helical coiled coil into a more open structure, thus mediating, within the ULFs, the conformational rearrangements of the tetrameric subunits that are needed for the intermediate filament elongation reaction.

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Year:  2009        PMID: 19422834     DOI: 10.1016/j.jmb.2009.04.067

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  36 in total

1.  Microtubule-dependent transport of vimentin filament precursors is regulated by actin and by the concerted action of Rho- and p21-activated kinases.

Authors:  Amélie Robert; Harald Herrmann; Michael W Davidson; Vladimir I Gelfand
Journal:  FASEB J       Date:  2014-03-20       Impact factor: 5.191

2.  A vimentin binding small molecule leads to mitotic disruption in mesenchymal cancers.

Authors:  Michael J Bollong; Mika Pietilä; Aaron D Pearson; Tapasree Roy Sarkar; Insha Ahmad; Rama Soundararajan; Costas A Lyssiotis; Sendurai A Mani; Peter G Schultz; Luke L Lairson
Journal:  Proc Natl Acad Sci U S A       Date:  2017-10-30       Impact factor: 11.205

Review 3.  Intermediate filaments: primary determinants of cell architecture and plasticity.

Authors:  Harald Herrmann; Sergei V Strelkov; Peter Burkhard; Ueli Aebi
Journal:  J Clin Invest       Date:  2009-07-01       Impact factor: 14.808

Review 4.  Intermediate Filaments: Structure and Assembly.

Authors:  Harald Herrmann; Ueli Aebi
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-11-01       Impact factor: 10.005

5.  Atomic structure of the vimentin central α-helical domain and its implications for intermediate filament assembly.

Authors:  Anastasia A Chernyatina; Stefan Nicolet; Ueli Aebi; Harald Herrmann; Sergei V Strelkov
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-06       Impact factor: 11.205

6.  Sequence-resolved free energy profiles of stress-bearing vimentin intermediate filaments.

Authors:  Beatrice Ramm; Johannes Stigler; Michael Hinczewski; D Thirumalai; Harald Herrmann; Günther Woehlke; Matthias Rief
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-21       Impact factor: 11.205

Review 7.  Intermediate filament mechanics in vitro and in the cell: from coiled coils to filaments, fibers and networks.

Authors:  Sarah Köster; David A Weitz; Robert D Goldman; Ueli Aebi; Harald Herrmann
Journal:  Curr Opin Cell Biol       Date:  2015-01-23       Impact factor: 8.382

8.  Structural Dynamics of the Vimentin Coiled-coil Contact Regions Involved in Filament Assembly as Revealed by Hydrogen-Deuterium Exchange.

Authors:  Aiswarya Premchandar; Norbert Mücke; Jarosław Poznański; Tatjana Wedig; Magdalena Kaus-Drobek; Harald Herrmann; Michał Dadlez
Journal:  J Biol Chem       Date:  2016-09-30       Impact factor: 5.157

9.  A crystal structure of coil 1B of vimentin in the filamentous form provides a model of a high-order assembly of a vimentin filament.

Authors:  Allan H Pang; Josiah M Obiero; Arkadiusz W Kulczyk; Vitaliy M Sviripa; Oleg V Tsodikov
Journal:  FEBS J       Date:  2018-06-25       Impact factor: 5.542

10.  Lateral association and elongation of vimentin intermediate filament proteins: A time-resolved light-scattering study.

Authors:  Carlos G Lopez; Oliva Saldanha; Klaus Huber; Sarah Köster
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-21       Impact factor: 11.205

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