Literature DB >> 19421584

Metallomics: the concept and methodology.

Sandra Mounicou1, Joanna Szpunar, Ryszard Lobinski.   

Abstract

The emerging field of metallomics refers to the entirety of research activities aimed at the understanding of the molecular mechanisms of metal-dependent life processes. This critical review discusses the concept of metallomics with a focus on analytical techniques and methods for the probing of interactions between metal ions and the organism's genome and the derived -omes: proteome and metabolome. Particular attention is paid to the in vivo screening for the native metal-protein and metal-metabolite complexes by hyphenated techniques that combine a high-resolution separation technique (gel electrophoresis, chromatography or capillary electrophoresis) with sensitive elemental (inductively coupled plasma, ICP) or molecular (electrospray or MALDI) mass spectrometric detection. The contribution of bioinformatics to the prediction of metal-binding sequences in proteins and the role of molecular biology approaches for the detection of metal-dependent genes, proteins and metabolites are highlighted (115 references).

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Year:  2009        PMID: 19421584     DOI: 10.1039/b713633c

Source DB:  PubMed          Journal:  Chem Soc Rev        ISSN: 0306-0012            Impact factor:   54.564


  36 in total

1.  Urinary metabolomics reveals novel interactions between metal exposure and amino acid metabolic stress during pregnancy.

Authors:  Mu Wang; Wei Xia; Hongbin Liu; Fang Liu; Han Li; Huailong Chang; Jie Sun; Wenyu Liu; Xiaojie Sun; Yangqian Jiang; Hongxiu Liu; Chuansha Wu; Xinyun Pan; Yuanyuan Li; Weiqing Rang; Songfeng Lu; Shunqing Xu
Journal:  Toxicol Res (Camb)       Date:  2018-07-24       Impact factor: 3.524

2.  Evolutionary inheritance of elemental stoichiometry in phytoplankton.

Authors:  Antonietta Quigg; Andrew J Irwin; Zoe V Finkel
Journal:  Proc Biol Sci       Date:  2010-09-08       Impact factor: 5.349

3.  Exploring the biochemical mechanisms of cytotoxic gold compounds: a proteomic study.

Authors:  Francesca Magherini; Alessandra Modesti; Luca Bini; Michele Puglia; Ida Landini; Stefania Nobili; Enrico Mini; Maria Agostina Cinellu; Chiara Gabbiani; Luigi Messori
Journal:  J Biol Inorg Chem       Date:  2010-01-29       Impact factor: 3.358

4.  Placental Metal Concentrations in Relation to Maternal and Infant Toenails in a U.S. Cohort.

Authors:  Tracy Punshon; Zhigang Li; Carmen J Marsit; Brian P Jackson; Emily R Baker; Margaret R Karagas
Journal:  Environ Sci Technol       Date:  2016-01-15       Impact factor: 9.028

5.  Native SDS-PAGE: high resolution electrophoretic separation of proteins with retention of native properties including bound metal ions.

Authors:  Andrew B Nowakowski; William J Wobig; David H Petering
Journal:  Metallomics       Date:  2014-05       Impact factor: 4.526

6.  Validation of a Metallomics Analysis of Placenta Tissue by Inductively-Coupled Plasma Mass Spectrometry.

Authors:  James M Harrington; Daniel J Young; Rebecca C Fry; Frank X Weber; Susan S Sumner; Keith E Levine
Journal:  Biol Trace Elem Res       Date:  2015-07-09       Impact factor: 3.738

Review 7.  Coordination chemistry of bacterial metal transport and sensing.

Authors:  Zhen Ma; Faith E Jacobsen; David P Giedroc
Journal:  Chem Rev       Date:  2009-10       Impact factor: 60.622

Review 8.  Metalloproteomics: forward and reverse approaches in metalloprotein structural and functional characterization.

Authors:  Wuxian Shi; Mark R Chance
Journal:  Curr Opin Chem Biol       Date:  2010-12-02       Impact factor: 8.822

9.  Determination of binding affinity of metal cofactor to the active site of methionine aminopeptidase based on quantitation of functional enzyme.

Authors:  Sergio C Chai; Jing-Ping Lu; Qi-Zhuang Ye
Journal:  Anal Biochem       Date:  2009-08-25       Impact factor: 3.365

10.  Coordination chemistry may explain pharmacokinetics and clinical response of vanadyl sulfate in type 2 diabetic patients.

Authors:  Gail R Willsky; Katherine Halvorsen; Michael E Godzala; Lai-Har Chi; Mathew J Most; Peter Kaszynski; Debbie C Crans; Allison B Goldfine; Paul J Kostyniak
Journal:  Metallomics       Date:  2013-11       Impact factor: 4.526

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