Literature DB >> 19419583

Identification of hematein as a novel inhibitor of protein kinase CK2 from a natural product library.

Ming-Szu Hung1, Zhidong Xu, Yu-Ching Lin, Jian-Hua Mao, Cheng-Ta Yang, Pey-Jium Chang, David M Jablons, Liang You.   

Abstract

BACKGROUND: Casein kinase 2 (CK2) is dysregulated in various human cancers and is a promising target for cancer therapy. To date, there is no small molecular CK2 inhibitor in clinical trial yet. With the aim to identify novel CK2 inhibitors, we screened a natural product library.
METHODS: We adopted cell-based proliferation and CK2 kinase assays to screen CK2 inhibitors from a natural compound library. Dose-dependent response of CK2 inhibitors in vitro was determined by a radioisotope kinase assay. Western blot analysis was used to evaluate down stream Akt phosphorylation and apoptosis. Apoptosis was also evaluated by annexin-V/propidium iodide (PI) labeling method using flow cytometry. Inhibition effects of CK2 inhibitors on the growth of cancer and normal cells were evaluated by cell proliferation and viability assays.
RESULTS: Hematein was identified as a novel CK2 inhibitor that is highly selective among a panel of kinases. It appears to be an ATP non-competitive and partially reversible CK2 inhibitor with an IC50 value of 0.55 muM. In addition, hematein inhibited cancer cell growth partially through down-regulation of Akt phosphorylation and induced apoptosis in these cells. Furthermore, hematein exerted stronger inhibition effects on the growth of cancer cells than in normal cells.
CONCLUSION: In this study, we showed that hematein is a novel selective and cell permeable small molecule CK2 inhibitor. Hematein showed stronger growth inhibition effects to cancer cells when compared to normal cells. This compound may represent a promising class of CK2 inhibitors.

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Year:  2009        PMID: 19419583      PMCID: PMC2696466          DOI: 10.1186/1471-2407-9-135

Source DB:  PubMed          Journal:  BMC Cancer        ISSN: 1471-2407            Impact factor:   4.430


Background

CK2 is a serine/threonine protein kinase composed of 2 catalytic subunits (αα, α'α' or αα') and 2 regulatory subunits (β). CK2 is ubiquitously expressed and highly conserved in cells and plays multiple roles in cellular processes, including gene expression, protein synthesis, cell proliferation and apoptosis[1]. So far, CK2 is known to phosphorylate more than 300 proteins in cells and is also an important regulator of intracellular signalling pathways[2]. For example, CK2 promotes survival by increasing survivin expression via beta-catenin-Tcf/Lef-mediated transcription[3]. CK2 also constitutively phosphorylates and upregulates Akt/PKB Ser129 in vitro and in vivo, which may be required for maximal activation of Akt/PKB[4]. Dysregulation of CK2 in association with other proteins also increases oncogenic potential of cells[5]. In transgenic mouse study, expression of CK2α subunits in lymphocyte induces lymphoma, and the coexpression of c-myc protein results in neonatal leukemia[6]. Overexpression of CK2α in the mammary gland of transgenic mouse induces mammary hyperplasia, dysplasia, and eventually adenocarcinomas[7]. In primary embryo fibroblasts, coexpression of CK2α' and H-Ras induces transformation[8]. Overexpression of CK2 has been noted in a variety of human cancers, including acute myeloid leukaemia[9], mammary gland[7], prostate[10], lung[11], head and neck[12], and kidney cancer[13], and also correlates with metastatic potential, undifferentiated histological type and poor clinical outcome in human cancers. As a result, CK2 is a potential candidate of targeted therapy for cancers[1]. Although CK2 inhibitors like TBB (4,5,6,7 tetrabrome benzotriazole)[14] and its derivatives[1,15] have been shown to induce apoptosis in human cancer cells, more selective CK2 inhibitors are needed, since to our knowledge there is still not one CK2 small molecule inhibitor in clinical trials for cancer treatment yet. In this study, we screened for potential CK2 inhibitors from a natural compound library via cell based proliferation and kinase assays. Through these assays, hematein was identified as a novel CK2 inhibitor. We further evaluated the dose dependent inhibition response of hematein on CK2 kinase activity in vitro and in cancer cells. Effects of hematein on apoptosis and cell growth were also evaluated in cancer and normal cells.

Methods

Cell culture

HeLa (CCL-2), HCT116 (CCL-247), A549 (CCL-185), A427 (HTB-53), WI-38 (CCL-75) and CCL-211 cell lines were purchased from American Type Culture Collection (Manassas, VA). Cells were grown in complete growth medium (Dulbecco's modified Eagle's medium for HeLa, A549 and CCL-211; Eagle's Minimum Essential Medium for WI-38; Roswell Park Memorial Institute's medium for HCT116 and A427) supplemented with 10% fetal bovine serum, 10 units/ml penicillin and 10 μg/ml streptomycin at 37°C and 5% CO2.

Compound library

A natural product library NPL 400 (Timtect Inc., Newark, DE) was used to screen possible CK2 inhibitors. This library is composed of 400 highly pure, rationally selected drug-like small-molecule compounds with molecular weights ranging from 183 to 832 Da. All compounds were 0.5 mg powder form in individual wells of 96-well plates. After dissolved with 100 μL of dimethyl sulfoxide (DMSO), compounds were stored at -20°C with final concentrations of 5 mg/ml. TBB was purchased from Sigma-Aldrich Co (St. Louis, MI).

Cell proliferation and viability assay

The CellTiter 96® AQueous One Solution Cell Proliferation Assay (MTS) (Promega, Madison, WI) was used to evaluate growth of normal and cancer cells after treatment by different compounds. Exponentially growing cells were plated in 96-well microtiter plates at 5 × 103 cells/well with indicated concentrations of compounds. After incubation with indicated amount of compounds for 48 hours, 20 μl of the CellTiter 96® AQueous One Solution Reagent was added directly to culture wells. Absorbance at 490 nm was recorded with a 96-well plate reader after 2 hours incubation. CellTiter-Glo luminescent cell viability assay (Promega, Madison, WI) was used to evaluate the cytotoxicity of hematein. After incubation with indicated amount of compounds for 48 hours, 100 μl of the CellTiter-Glo reagent was added directly to culture wells. Following procedures recommended by the manufacture, the luminescence produced by the luciferase-catalyzed reaction of luciferin and ATP was measured using a laminator.

Kinase assays

The CK2 Kinase Assay/Inhibitor Screening Kit (CycLex Co. Ltd., Japan) was used for further screening of compounds for their CK2 inhibition effects in vitro according to manufacture's manual[16]. For determination of the dose dependent inhibition response of hematein, Casein Kinase 2 Assay Kit (Millipore, Bedford, MA) was used according to manufacture's protocol. Kinase assay was carried out in the presence of increasing amount of hematein in a final volume of 50 μl containing 20 mM MOPS (pH 7.2), 25 mM β-glycerol phosphate, 5 mM EGTA, 1 mM sodium orthovanadate, 1 mM dithiothreitol, 15 mM Mgcl2, 200 μM for CK2 substrate peptide: RRRDDDSDDD (Millipore, Bedford, MA), 0.05 μg purified active CK2 (Millipore, Bedford, MA) and [γ-33P]-ATP. After incubation in 30°C for 20 minutes, assay was stopped by adding of 20 μl 4% trichloroacetic acid and transferred 25 μl to P81 phosphocellulose squares. After washing with 0.75% phosphoric acid for 6 times and with acetone for 1 time, phosphocellulose squares were dried and transferred to scintillation vials for counting.

Western blot analysis

After treated with indicated concentration of hematein for 48 hours, whole cell protein were extracted from A549 cells with M-PER Mammalian Protein Extraction Reagent (Pierce, Rockfold, IL) added with Phosphatase Inhibitor Cocktail Set II (Calbiochem, San Diego, CA) and Complete Protease Inhibitor Cocktails (Roche, Switzerland) according to manufactures' protocols. The proteins were used for further CK2 kinase activity assay or western blot analysis. For western blot analysis, the proteins were separated on 4–15% gradient sodium dodecyl sulfate (SDS)-polyacrylamide gels and transferred to Immobilon-P membranes (Millipore, Billerica, MA). Following primary antibodies: Akt, PARP (Cell Signaling Technology, Danvers, MA), phospho-Akt S129 (Abcam Inc., Cambridge, MA) and β-actin (Sigma, St. Louis, MO) were used. After binding to indicated secondary antibodies, an enhanced chemiluminescence (ECL) blotting analysis system (GE Healthcare Life Sciences, Piscataway, NJ) was used for antigen-antibody detection.

Apoptosis assay

The occurrence of apoptosis was determined by ApoTarget™ annexin V-FITC kit (BioSource International, Inc., Camarillo, CA). Briefly, cells were treated with indicated amounts of DMSO or hematein for 48 hours. The cells were washed with cold PBS and then re-suspended in binding buffer. The cells were aliquot to 100 μl in a concentration of 1 × 106/ml. After adding 5 μl of annexin V-FITC and 20 μl of PI and incubated in dark for 15 minutes, the cells were resuspended in 400 μl of binding buffer. Accuri's C6 Flow Cytometer™ System (Accuri Cytometers, Ann Arbor, MI) was used for analysis.

Statistical analysis

The data shown represent mean values ± standard error of deviation (SD). Student's t-test was used for comparing of cell viability in different treatments. Statistical analysis was carried out using SPSS (version 10.0, Chicago, IL). Significance was defined as p < 0.05 with two sided analysis. The half maximal inhibitory concentration (IC50) values was determined using GraphPad Prism® log (inhibitor) vs. response (variable slope) software (version 5, La Jolla, CA).

Results

Screening CK2 inhibitors from a natural compound library

First, a cell based MTS cell proliferation assay was used to evaluate the inhibitory effects of 400 compounds from NPL compound library on cell proliferation of HCT116 cells. HCT116 cell was selected for initial screening because previous studies showed that this cell line was inhibited by CK2 inhibitors[17,18]. After incubation for 48 hours in 96-wells plates, a number of compounds including 4A3, 4A6 and 4A9, showed inhibition effects on HCT116 cells proliferation compared to control samples (DMSO) (Fig 1A).
Figure 1

Inhibition effects of compounds plate 4 on HCT116 cells proliferation and in-vitro inhibition effects of selected compounds on CK2 kinase activity. A. After incubation with HCT116 cells for 48 hours, compounds 4A3 (hematein), 4A6 and 4A9 showed inhibitory effects on cell proliferation compared to the control sample (*4A1, DMSO). The longitudinal values revealed the absorbance at 490 nm recorded using an ELISA plate reader after addition of Cell Titer 96 AQueous One Solution Reagent to each well for 2 hours. Data represents the average of duplicate wells and bars indicate SD. Compound concentration: 4A3: 16.6 μM; 4A6: 23.1 μM; 4A9: 14.2 μM. B. Equal amounts (100 μM) of compounds were incubated with purified CK2, and CK2 activity was measured by Cyclex CK2 Assay/Inhibitor Screening Kit using 100 μM ATP. Ck2 kinase activity is represented as relative CK2 activity to controls (DMSO). Data represents the average of duplicate wells and bars indicate SD.4A3: hematein. Other negative results are not shown.

Inhibition effects of compounds plate 4 on HCT116 cells proliferation and in-vitro inhibition effects of selected compounds on CK2 kinase activity. A. After incubation with HCT116 cells for 48 hours, compounds 4A3 (hematein), 4A6 and 4A9 showed inhibitory effects on cell proliferation compared to the control sample (*4A1, DMSO). The longitudinal values revealed the absorbance at 490 nm recorded using an ELISA plate reader after addition of Cell Titer 96 AQueous One Solution Reagent to each well for 2 hours. Data represents the average of duplicate wells and bars indicate SD. Compound concentration: 4A3: 16.6 μM; 4A6: 23.1 μM; 4A9: 14.2 μM. B. Equal amounts (100 μM) of compounds were incubated with purified CK2, and CK2 activity was measured by Cyclex CK2 Assay/Inhibitor Screening Kit using 100 μM ATP. Ck2 kinase activity is represented as relative CK2 activity to controls (DMSO). Data represents the average of duplicate wells and bars indicate SD.4A3: hematein. Other negative results are not shown. Second, a non-isotopic CK2 kinase assay was performed to test the compounds selected from cell based inhibitory assay for their ability to inhibit CK2 kinase activity in vitro. Equal concentrations of the indicated compounds were incubated with purified CK2, and their inhibition effects were evaluated using 100 μM ATP. Compared to 4A6 and 4A9 compounds, 4A3 compound exerts stronger inhibition effect on CK2 kinase activity in vitro (Fig. 1B). Third, the inhibition effects of selected compounds were further validated by radioisotope CK2 kinase assay at 10 μM ATP and similar results were noted (Fig. 2A). The 4A3 compound is hematein (3, 4, 10, 6a-tetrahydroxy-7, 6a-dihydroindeno [2, 1-c] chroman-9-one) (Fig 2B).
Figure 2

Validation of inhibition effects of selected compounds on CK2 kinase activity and structures of compounds. A. Inhibition effects of selected compounds on CK2 kinase activity was validated by radioisotope kinase assay at a concentration of 10 μM compound using 10 μM ATP. TBB is the positive control. Ck2 kinase activity is represented as relative CK2 activity to controls (DMSO). Data represents the average of duplicate experiments and bars indicate SD.4A3: hematein. B. Structure of compounds: 4A3 (hematein): 3, 4, 10, 6a-tetrahydroxy-7, 6a-dihydroindeno [2, 1-c] chroman-9-one MW 300.26, CAS No. 15489-90-4; 4A6: 5-methoxyfurano [3,2-g]chromen-2-one; 4A9: 4-hydroxy-3-{2- [8-hydroxy-7-(hydroxymethyl)-1,7-dimethyl-3-methylenebicyclo[4. 4.0]dec-2-yl]ethylidene}-4,5-dihydrofuran-2-one.

Validation of inhibition effects of selected compounds on CK2 kinase activity and structures of compounds. A. Inhibition effects of selected compounds on CK2 kinase activity was validated by radioisotope kinase assay at a concentration of 10 μM compound using 10 μM ATP. TBB is the positive control. Ck2 kinase activity is represented as relative CK2 activity to controls (DMSO). Data represents the average of duplicate experiments and bars indicate SD.4A3: hematein. B. Structure of compounds: 4A3 (hematein): 3, 4, 10, 6a-tetrahydroxy-7, 6a-dihydroindeno [2, 1-c] chroman-9-one MW 300.26, CAS No. 15489-90-4; 4A6: 5-methoxyfurano [3,2-g]chromen-2-one; 4A9: 4-hydroxy-3-{2- [8-hydroxy-7-(hydroxymethyl)-1,7-dimethyl-3-methylenebicyclo[4. 4.0]dec-2-yl]ethylidene}-4,5-dihydrofuran-2-one.

Hematein inhibits CK2 kinase activity in a selective, dose-dependent and ATP non-competitive manner in vitro

With the purpose to elucidate the specificity of hematein to CK2, a kinase panel provided by KinaseProfiler™ service (Millipore, Dundee, UK) was performed. Among 48 kinases tested in the presence of 10 μM ATP and 10 μM hematein, hematein exerts > 90% inhibition toward CK2 (Table 1). The IC50 value of hematein is 0.55 μM in the presence of 10 μM ATP (Fig 3A). However, the IC50 value did not increase in correspondence to 100 μM ATP (0.27 μM) (Fig 3A). Kinetics study was further performed and the Linewear-Burk plots showed that hematein is an ATP non-competitive inhibitor (Fig 3B).
Table 1

Specificity spectrum of hematein.

Protein kinaseKinase activity (%)Protein kinaseKinase activity (%)
Abl76Lyn111
CDK195MAPK187
CDK2113MAPK274
CDK355MKK699
CDK584MSK191
CDK7106MSK272
CHK165mTOR103
CK182p70S6K61
CK20PDGFRα103
cKit83PDK196
c-RAF102Pim-158
cSRC94Pim-281
DRAK151Pim-350
DYRK291PKA95
EGFR31PKBα92
Flt131PKCα36
Flt383PKD258
GCK94PRAK65
GSK3β147ROCK-II75
HIPK194SAPK2a121
HIPK276SAPK399
HIPK396SAPK4112
KDR62SGK92
Lck113Syk136

Residual activity is determined in the presence of 10 μM hematein under 10 μM ATP and expressed as a percentage of the control without inhibitor. Residual activities ≤ 10% are shown in bold. CDK, cyclin-dependent kinase; CHK, checkpoint kinase; CK, casein kinase; SRC, sarcoma kinase; DRAK, DAP kinase-related apoptosis-inducing protein kinase; DYRK, dual-specificity tyrosine-(Y)-phosphorylation regulated kinase; EGFR, epidermal growth factor receptor; Flt, fms-related tyrosine kinase; GCK, gluokinase; GSK, glycogen synthase kinase; HIPK, homeodomain interacting protein kinase; KDR, kinase insert domain receptor; Lck, lymphocyte cell-specific protein-tyrosine kinase; MAPK, mitogen-activated protein kinase; MKK, mitogen-activated kinase; MSK, mitogen- and stress-activated protein kinase; mTOR, mammalian target of rapamyin; p70S6K, p70 S6 kinase; PDGFR, platelet-derived growth factor receptor; PDK, 3'-phosphoinositide-dependent kinase; PKA, protein kinase A; PKB, protein kinase B; PKC, protein kinase C; PKD, protein kinase D; PRAK, p38-regulated activated kinase; ROCK, Rho-dependent protein kinase; SRPK, serine-arginine protein kinase; SGK, serum and glucocorticoid-inducible kinase.

Figure 3

Dose- dependent response, kinetics analysis and reversibility assay of CK2 inhibition by hematein. A. CK2 was assayed with specific peptide described in the material and method section with the increasing concentrations of the inhibitor using 10 μM and 100 μM ATP. B. The Linewear-Burk plots illustrate the non-competitive inhibition of hematein relative to ATP toward CK2. Substrate concentration was fixed at 200 μM. CK2 activity was determined in 0 μM, 1 μ and 4 μM hematein. The data represents means of duplicate experiments with SE never exceeding 10%. C. Reversibility assay of hematein. Hematein was pre-incubated with CK2 at a concentration of 5 μM for 30 minutes and then kinase assay was performed under 0.2 μM final concentration of hematein. Ck2 kinase activity is represented as relative CK2 activity to controls (DMSO). Data points represent the average of duplicate experiments and bars indicate SD. D. The Linewear-Burk plots illustrate the mixed inhibition of hematein relative to substrate toward CK2. ATP concentration was fixed at 10 μM. CK2 activity was determined in 0 μM, 1 μM and 4 μM hematein. The data represents means of duplicate experiments with SE never exceeding 10%.

Specificity spectrum of hematein. Residual activity is determined in the presence of 10 μM hematein under 10 μM ATP and expressed as a percentage of the control without inhibitor. Residual activities ≤ 10% are shown in bold. CDK, cyclin-dependent kinase; CHK, checkpoint kinase; CK, casein kinase; SRC, sarcoma kinase; DRAK, DAP kinase-related apoptosis-inducing protein kinase; DYRK, dual-specificity tyrosine-(Y)-phosphorylation regulated kinase; EGFR, epidermal growth factor receptor; Flt, fms-related tyrosine kinase; GCK, gluokinase; GSK, glycogen synthase kinase; HIPK, homeodomain interacting protein kinase; KDR, kinase insert domain receptor; Lck, lymphocyte cell-specific protein-tyrosine kinase; MAPK, mitogen-activated protein kinase; MKK, mitogen-activated kinase; MSK, mitogen- and stress-activated protein kinase; mTOR, mammalian target of rapamyin; p70S6K, p70 S6 kinase; PDGFR, platelet-derived growth factor receptor; PDK, 3'-phosphoinositide-dependent kinase; PKA, protein kinase A; PKB, protein kinase B; PKC, protein kinase C; PKD, protein kinase D; PRAK, p38-regulated activated kinase; ROCK, Rho-dependent protein kinase; SRPK, serine-arginine protein kinase; SGK, serum and glucocorticoid-inducible kinase. Dose- dependent response, kinetics analysis and reversibility assay of CK2 inhibition by hematein. A. CK2 was assayed with specific peptide described in the material and method section with the increasing concentrations of the inhibitor using 10 μM and 100 μM ATP. B. The Linewear-Burk plots illustrate the non-competitive inhibition of hematein relative to ATP toward CK2. Substrate concentration was fixed at 200 μM. CK2 activity was determined in 0 μM, 1 μ and 4 μM hematein. The data represents means of duplicate experiments with SE never exceeding 10%. C. Reversibility assay of hematein. Hematein was pre-incubated with CK2 at a concentration of 5 μM for 30 minutes and then kinase assay was performed under 0.2 μM final concentration of hematein. Ck2 kinase activity is represented as relative CK2 activity to controls (DMSO). Data points represent the average of duplicate experiments and bars indicate SD. D. The Linewear-Burk plots illustrate the mixed inhibition of hematein relative to substrate toward CK2. ATP concentration was fixed at 10 μM. CK2 activity was determined in 0 μM, 1 μM and 4 μM hematein. The data represents means of duplicate experiments with SE never exceeding 10%.

Hematein inhibits CK2 kinase activity in a partially reversible manner in vitro

Reversibility test was performed with pre-incubation of hematein with CK2 in a concentration of 5 μM for 30 minutes. CK2 kinase assay was then performed with the final concentration of 0.2 μM hematein. The group with pre-incubation showed roughly 50% kinase activity of the group without pre-incubation (Fig 3C), indicating that hematein is a partially reversible inhibitor toward CK2.

Hematein exhibits a mixed inhibition against substrate in vitro

The Linewear-Burk plots showed that hematein exhibited a mixed inhibition against substrate RRRDDDSDDD (Fig 3D). The apparent dissociation constants for hematein binding were calculated from secondary plots of the slopes or intercepts obtained from the Linewear-Burk plots. A secondary plot of the slopes indicated a Kis value of 0.58 ± 0.09 μM (representing a reversible binding of hematein to CK2) and a secondary plot of the y-axis intercepts revealed a Kii value of 2.13 ± 0.67 μM (representing a reversible binding of hematein to CK2-substrate complex).

Hematein inhibits CK2 kinase activity and down stream Akt phosphorylation, and induces apoptosis in A549 lung cancer cells

Since CK2 kinase showed dose dependent response to hematein inhibition in vitro, we further evaluated inhibition effects of hematein on intact cancer cells. First, A549 lung cancer cells were treated with different concentrations of hematein (0 μM to 200 μM), and cellular viability was measured after 48 hours. Dose dependent response to inhibition of hematein was noted in A549 cells (Fig 4A). We next measured CK2 kinase activity in the lysate of these cells with the same amount of total protein via a radioisotope CK2 kinase assay described in materials and methods section. Dose dependent inhibition responses of CK2 kinase activity were noted in cells treated with 50 μM and 100 μM of hematein (Fig 4B). Interestingly, Akt Ser129, which is phosphorylated by CK2 in vitro and in vivo, also showed significantly decreased phosphorylation in the cells above (Fig 4C). However, total CK2, total Akt and β-actin were comparable. Increased cleaved PARP were also detected in cell lysate treated with 50 μM and 100 μM of hematein (Fig 4C), which indicated increased caspase dependent apoptosis of cancer cells after hematein treatment. Compared to DMSO treated cells, significantly increased apoptotic cells were noted in cells treated with 50 μM and 100 μM of hematein for 48 hours (Fig 4D).
Figure 4

Inhibition effects of hematein on cellular viability and kinase activity in cancer cells. A. A549 cells were treated with serial dilutions of hematein (0 to 200 μM) and cellular viability (normalized to DMSO control) was measured after 48 hours. Data points represent the average of duplicate wells in triplet experiments and bars indicate SD. B. A549 cells were treated with DMSO (control), 50 μM and 100 μM of hematein for 48 hours. Upper western blot panel showed total amount of CK2 used for CK2 kinase assay, and lower table showed relative CK2 kinase activity (normalized to DMSO control) under different hematein concentrations. Data points represent the average of duplicate experiments and bars indicate SD. C. Phosphorylated Akt (Ser 129), total Akt, and PARP were measured by western blot analysis. β-Actin was used as internal loading control. Bands quantization of phosphorylated Akt (Ser 129) was obtained by an analysis with Quantity One 1-D analysis software. Values are reported below each band and normalized to DMSO control. "*" denotes p < 0.05 when compared with control values in triplet experiments. D. The fraction of cells undergoing apoptotic cell death was detected using annexin V FITC and PI stain. Data points represent the average of triplet independent experiments and bars indicate SD. "*" denotes p < 0.05 when compared with the control values.

Inhibition effects of hematein on cellular viability and kinase activity in cancer cells. A. A549 cells were treated with serial dilutions of hematein (0 to 200 μM) and cellular viability (normalized to DMSO control) was measured after 48 hours. Data points represent the average of duplicate wells in triplet experiments and bars indicate SD. B. A549 cells were treated with DMSO (control), 50 μM and 100 μM of hematein for 48 hours. Upper western blot panel showed total amount of CK2 used for CK2 kinase assay, and lower table showed relative CK2 kinase activity (normalized to DMSO control) under different hematein concentrations. Data points represent the average of duplicate experiments and bars indicate SD. C. Phosphorylated Akt (Ser 129), total Akt, and PARP were measured by western blot analysis. β-Actin was used as internal loading control. Bands quantization of phosphorylated Akt (Ser 129) was obtained by an analysis with Quantity One 1-D analysis software. Values are reported below each band and normalized to DMSO control. "*" denotes p < 0.05 when compared with control values in triplet experiments. D. The fraction of cells undergoing apoptotic cell death was detected using annexin V FITC and PI stain. Data points represent the average of triplet independent experiments and bars indicate SD. "*" denotes p < 0.05 when compared with the control values.

Hematein has more inhibition effects to cancer cells growth

Finally, we compared inhibition effects of hematein on normal and cancer cells. Cytotoxicity of hematein against normal and cancer cells was measured using the CellTiter-Glo luminescent cell viability assay (Promega, Madison, WI) to overcome the interference of hematein to MTS assay. Indicated cells were treated with different concentrations of hematein for 48 hours, and cell viability was measured by the CellTiter-Glo luminescent cell viability assay. From dose response curve, IC50 values were calculated in CCL-211 (118.3 ± 15.7 μM) and WI-38 (150.3 ± 26 μM) normal cells than in Hela (57.7 ± 3.4 μM), A549 (90.0 ± 3.8 μM), A427 (62.9 ± 1.7 μM) and HCT116 (100.4 ± 7.3 μM) cancer cells (Fig 5A). Significantly higher IC50 values (p < 0.05) were noted in CCL-211 cells compared to Hela, A549 and A427 cells, and in WI-38 cells compared to Hela, A549, A427 and HCT116 cells. As the result, hematein has stronger inhibition effects towards cancer cells. We also took the advantage of the staining property of hematein to observe whether normal cells uptake hematein and hematein nuclear staining was noted in cells after treated with 50 μM hematein for 48 hours (Fig 5B).
Figure 5

Inhibition effects of hematein on cellular growth in normal and cancer cells. A. Normal (WI-38, CCL-211) and cancer (Hela, A549 and A427, HCT116) cells were cultured in the absence and in increasing concentrations of hematein (10 μM to 100 μM) as indicated. Cellular viability (normalized to DMSO control) was measured after 48 hours using CellTiter-Glo® Luminescent cell viability assay. Data points represent the average of IC50 value of hematein in triplet experiments and bars indicate SD. "*" denotes p < 0.05 when compared with IC50 values of CCL-211 cells and "†" denotes p < 0.05 when compared with IC50 values of WI-38 cells. B. CCL-211 cells were incubated in the absence and presence of 50 μM hematein for 48 hours. Block arrows indicate staining of the nucleus after hematein incubation. Original magnification: × 100.

Inhibition effects of hematein on cellular growth in normal and cancer cells. A. Normal (WI-38, CCL-211) and cancer (Hela, A549 and A427, HCT116) cells were cultured in the absence and in increasing concentrations of hematein (10 μM to 100 μM) as indicated. Cellular viability (normalized to DMSO control) was measured after 48 hours using CellTiter-Glo® Luminescent cell viability assay. Data points represent the average of IC50 value of hematein in triplet experiments and bars indicate SD. "*" denotes p < 0.05 when compared with IC50 values of CCL-211 cells and "†" denotes p < 0.05 when compared with IC50 values of WI-38 cells. B. CCL-211 cells were incubated in the absence and presence of 50 μM hematein for 48 hours. Block arrows indicate staining of the nucleus after hematein incubation. Original magnification: × 100.

Discussion

Cell-based screening of compound libraries have been adopted to discover possible anti-cancer small molecules in myeloma, breast cancer and colon cancer cells [19-21]. In this study, we also combined a cell based assay with kinase assay for screening CK2 inhibitors from a natural compound library. Through these assays, we identified and validated hematein as a novel CK2 kinase inhibitor. Hematein is a natural compound isolated from Caesalpinia sappan, and has been used as a herbal drug in oriental medicine as both an analgesic and an anti-inflammatory agent[16] and also used in staining [22]. Our study for the first time discovered that hematein as a CK2 kinase inhibitor both in vitro and in cancer cells. The in vitro IC50 value of hematein (0.55 μM) on CK2 kinase activity is comparable to other CK2 inhibitors ever discovered, such as [5-oxo-5, 6-dihydroindolo-(1, 2-a) quinazolin-7-yl] acetic acid (IQA) (0.39 μM), TBB (0.50 μM) [1], 1, 3, 8-trihydroxyanthraquinone (emodin) (0.89 μM) and 2-Dimethylamino-4,5,6,7-tetrabromo-1 H-benzimidazole (DMAT) (0.15 μM)[15]. Kinetic assays in our study also showed that hematein is an ATP non-competitive inhibitor toward CK2. Non-competitive inhibitor of ATP has been shown to be less toxic, and has the advantage of no need to compete with high intracellular ATP concentration. Our data implies that hematein may inhibit CK2 through an allosteric mechanism. Recently, Raaf et al reported an allosteric binding site for the small molecule CK2 inhibitor 5,6-dichloro-1-beta-D-ribofuranosylbenzimidazole (DRB)[23]. More studies are needed to understand thoroughly the nature and mechanisms of the CK2 inhibition by hematein. We showed that hematein also induced apoptosis of cancer cells. Earlier studies indicate that CK2 plays a key role in suppression of apoptosis. Overexpression of CK2 in cancer cells protects cells from etoposide- and diethylstilbestrol-induced apoptosis[24], results in suppression of apoptosis mediated by tumor necrotic factoralpha (TNF-α), TRAIL and Fas L, and augments apoptosis in cells responsive to these ligands[16]. It has been noted that treatment of a variety of cancer cells with cell permeable CK2 inhibitors such as TBB, IQA and DMAT results in activation of caspases and then aopotosis[1,14,25]. Hematein is reported to reduce the TNF-α-induced expression of vascular cell adhesion molecule-1 (VCAM-1) and monocyte chemotactic protein-1 (MCP-1)[16,26], and to decrease reactive oxygen species generation and nuclear factor-kappa B (NF-κB) activation [27]. In our study, hematein inhibited Akt/PKB Ser129 phosphorylation in cancer cells. Akt/PKB Ser129 plays a role in constitutive activation of Akt/PKB pathway by CK2[4], which promotes cell survival through activation of anti-apoptotic pathways such as NF-κB pathway and suppression of caspases activity[28]. Thus, hematein induces apoptosis in cancer cells at least partially through inhibition of Akt/PKB pathway by down regulation of CK2 kinase and then decreased phosphorylation of Akt/PKB Ser129. Compared to TBB, hematein has similar on CK2 kinase inhibition in vitro and in cancer cells. However, TBB exerts inhibition effects on both normal and cancer cells[29]. In the contrary, hematein exerts relatively stronger inhibition effects on cancer cells than in normal cells in our study. Since hematein exerts different inhibition effects on the growth of cancer and normal cells, which is probably due to its ATP non-competitive inhibition mechanism and high selectivity. Thus, hematein may provide a clue for design of new class of CK2 inhibitors.

Conclusion

In this study, we identified hematein as a novel CK2 small molecule inhibitor from a natural compound library and showed that hematein is a selective and cell permeable CK2 inhibitor. Hematein showed stronger growth inhibition effects to cancer cells when compared to normal cells. This compound may represent a promising class of CK2 inhibitors.

Competing interests

The authors declare that they have no competing interests.

Authors' contributions

MSH carried out the kinase assay, western blot analysis, and apoptosis studies and also drafted the manuscript. LY and DMJ designed the study and revised the manuscript. ZX, and YCL carried the kinase assay and cell lines experiments. JHM, CTY and PJC revised the manuscript. All authors read and approved the final manuscript.

Pre-publication history

The pre-publication history for this paper can be accessed here: http://www.biomedcentral.com/1471-2407/9/135/prepub
  29 in total

1.  Target discovery in small-molecule cell-based screens by in situ proteome reactivity profiling.

Authors:  Michael J Evans; Alan Saghatelian; Erik J Sorensen; Benjamin F Cravatt
Journal:  Nat Biotechnol       Date:  2005-10-02       Impact factor: 54.908

2.  Protein kinase CK2 phosphorylates and upregulates Akt/PKB.

Authors:  G Di Maira; M Salvi; G Arrigoni; O Marin; S Sarno; F Brustolon; L A Pinna; M Ruzzene
Journal:  Cell Death Differ       Date:  2005-06       Impact factor: 15.828

3.  New investigations on hematoxylin, hematein, and hematein-aluminium complexes. II. Hematein-aluminium complexes and hemalum staining.

Authors:  C Bettinger; H W Zimmermann
Journal:  Histochemistry       Date:  1991

4.  Identification of a novel synthetic thiazolidin compound capable of inducing c-Jun NH2-terminal kinase-dependent apoptosis in human colon cancer cells.

Authors:  Fuminori Teraishi; Shuhong Wu; Lidong Zhang; Wei Guo; John J Davis; Fengqin Dong; Bingliang Fang
Journal:  Cancer Res       Date:  2005-07-15       Impact factor: 12.701

Review 5.  Targeting CK2 for cancer therapy.

Authors:  Kashif A Ahmad; Guixia Wang; Joel Slaton; Gretchen Unger; Khalil Ahmed
Journal:  Anticancer Drugs       Date:  2005-11       Impact factor: 2.248

6.  2-Dimethylamino-4,5,6,7-tetrabromo-1H-benzimidazole: a novel powerful and selective inhibitor of protein kinase CK2.

Authors:  Mario A Pagano; Flavio Meggio; Maria Ruzzene; Mariola Andrzejewska; Zygmunt Kazimierczuk; Lorenzo A Pinna
Journal:  Biochem Biophys Res Commun       Date:  2004-09-03       Impact factor: 3.575

7.  Association of elevated protein kinase CK2 activity with aggressive behavior of squamous cell carcinoma of the head and neck.

Authors:  M Gapany; R A Faust; S Tawfic; A Davis; G L Adams; K Ahmed
Journal:  Mol Med       Date:  1995-09       Impact factor: 6.354

8.  Protein kinase CK2alpha' is induced by serum as a delayed early gene and cooperates with Ha-ras in fibroblast transformation.

Authors:  M Orlandini; F Semplici; R Ferruzzi; F Meggio; L A Pinna; S Oliviero
Journal:  J Biol Chem       Date:  1998-08-14       Impact factor: 5.157

9.  Casein kinase II alpha transgene-induced murine lymphoma: relation to theileriosis in cattle.

Authors:  D C Seldin; P Leder
Journal:  Science       Date:  1995-02-10       Impact factor: 47.728

10.  Screening of an annotated compound library for drug activity in a resistant myeloma cell line.

Authors:  Linda Rickardson; Mårten Fryknäs; Caroline Haglund; Henrik Lövborg; Peter Nygren; Mats G Gustafsson; Anders Isaksson; Rolf Larsson
Journal:  Cancer Chemother Pharmacol       Date:  2006-03-10       Impact factor: 3.333

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  6 in total

1.  Identification of novel CK2 inhibitors with a benzofuran scaffold by novel non-radiometric in vitro assays.

Authors:  Andreas Gratz; Uwe Kuckländer; Ricardo Bollig; Claudia Götz; Joachim Jose
Journal:  Mol Cell Biochem       Date:  2011-07-13       Impact factor: 3.396

2.  Potential signaling pathways as therapeutic targets for overcoming chemoresistance in mucinous ovarian cancer.

Authors:  Emiko Niiro; Sachiko Morioka; Kana Iwai; Yuki Yamada; Kenji Ogawa; Naoki Kawahara; Hiroshi Kobayashi
Journal:  Biomed Rep       Date:  2018-01-17

Review 3.  EGFR-PI3K-AKT-mTOR signaling in head and neck squamous cell carcinomas: attractive targets for molecular-oriented therapy.

Authors:  Christian Freudlsperger; Jeffrey R Burnett; Jay A Friedman; Vishnu R Kannabiran; Zhong Chen; Carter Van Waes
Journal:  Expert Opin Ther Targets       Date:  2010-11-26       Impact factor: 6.902

4.  Hematein, a casein kinase II inhibitor, inhibits lung cancer tumor growth in a murine xenograft model.

Authors:  Ming-Szu Hung; Zhidong Xu; Yu Chen; Emmanuel Smith; Jian-Hua Mao; David Hsieh; Yu-Ching Lin; Cheng-Ta Yang; David M Jablons; Liang You
Journal:  Int J Oncol       Date:  2013-09-04       Impact factor: 5.650

Review 5.  CK2 in Cancer: Cellular and Biochemical Mechanisms and Potential Therapeutic Target.

Authors:  Melissa M J Chua; Charina E Ortega; Ayesha Sheikh; Migi Lee; Hussein Abdul-Rassoul; Kevan L Hartshorn; Isabel Dominguez
Journal:  Pharmaceuticals (Basel)       Date:  2017-01-28

Review 6.  [Protein kinase CK2 and human malignant tumors].

Authors:  Yixuan Huang; Shaohua Zhou; Hongsheng Xue; Zhilong Zhao; Lin Wang
Journal:  Zhongguo Fei Ai Za Zhi       Date:  2012-07
  6 in total

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