Literature DB >> 19414603

The peroxisome proliferator-activated receptor gamma/retinoid X receptor alpha heterodimer targets the histone modification enzyme PR-Set7/Setd8 gene and regulates adipogenesis through a positive feedback loop.

Ken-ichi Wakabayashi1, Masashi Okamura, Shuichi Tsutsumi, Naoko S Nishikawa, Toshiya Tanaka, Iori Sakakibara, Jun-ichi Kitakami, Sigeo Ihara, Yuichi Hashimoto, Takao Hamakubo, Tatsuhiko Kodama, Hiroyuki Aburatani, Juro Sakai.   

Abstract

Control of cell differentiation occurs through transcriptional mechanisms and through epigenetic modification. Using a chromatin immunoprecipitation-on-chip approach, we performed a genome-wide search for target genes of peroxisome proliferator-activated receptor gamma (PPAR gamma) and its partner protein retinoid X receptor alpha during adipogenesis. We show that these two receptors target several genes that encode histone lysine methyltransferase SET domain proteins. The histone H4 Lys 20 (H4K20) monomethyltransferase PR-Set7/Setd8 gene is upregulated by PPAR gamma during adipogenesis, and the knockdown of PR-Set7/Setd8 suppressed adipogenesis. Intriguingly, monomethylated H4K20 (H4K20me1) levels are robustly increased toward the end of differentiation. PR-Set7/Setd8 positively regulates the expression of PPAR gamma and its targets through H4K20 monomethylation. Furthermore, the activation of PPAR gamma transcriptional activity leads to the induction of H4K20me1 modification of PPAR gamma and its targets and thereby promotes adipogenesis. We also show that PPAR gamma targets PPAR gamma2 and promotes its gene expression through H4K20 monomethylation. Our results connect transcriptional regulation and epigenetic chromatin modulation through H4K20 monomethylation during adipogenesis through a feedback loop.

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Year:  2009        PMID: 19414603      PMCID: PMC2698772          DOI: 10.1128/MCB.01856-08

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  34 in total

1.  Genomic approach for the understanding of dynamic aspect of chromosome behavior.

Authors:  Yuki Katou; Kiyofumi Kaneshiro; Hiroyuki Aburatani; Katsuhiko Shirahige
Journal:  Methods Enzymol       Date:  2006       Impact factor: 1.600

2.  NOTCH1 directly regulates c-MYC and activates a feed-forward-loop transcriptional network promoting leukemic cell growth.

Authors:  Teresa Palomero; Wei Keat Lim; Duncan T Odom; Maria Luisa Sulis; Pedro J Real; Adam Margolin; Kelly C Barnes; Jennifer O'Neil; Donna Neuberg; Andrew P Weng; Jon C Aster; Francois Sigaux; Jean Soulier; A Thomas Look; Richard A Young; Andrea Califano; Adolfo A Ferrando
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-17       Impact factor: 11.205

Review 3.  Transcriptional control of adipocyte formation.

Authors:  Stephen R Farmer
Journal:  Cell Metab       Date:  2006-10       Impact factor: 27.287

4.  Profile of histone lysine methylation across transcribed mammalian chromatin.

Authors:  Christopher R Vakoc; Mira M Sachdeva; Hongxin Wang; Gerd A Blobel
Journal:  Mol Cell Biol       Date:  2006-10-09       Impact factor: 4.272

5.  Activation of CCAAT/enhancer-binding protein (C/EBP) alpha expression by C/EBP beta during adipogenesis requires a peroxisome proliferator-activated receptor-gamma-associated repression of HDAC1 at the C/ebp alpha gene promoter.

Authors:  Ying Zuo; Li Qiang; Stephen R Farmer
Journal:  J Biol Chem       Date:  2006-01-23       Impact factor: 5.157

6.  High-resolution profiling of histone methylations in the human genome.

Authors:  Artem Barski; Suresh Cuddapah; Kairong Cui; Tae-Young Roh; Dustin E Schones; Zhibin Wang; Gang Wei; Iouri Chepelev; Keji Zhao
Journal:  Cell       Date:  2007-05-18       Impact factor: 41.582

7.  High-resolution mapping of DNA methylation in human genome using oligonucleotide tiling array.

Authors:  Hiroshi Hayashi; Genta Nagae; Shuichi Tsutsumi; Kiyofumi Kaneshiro; Takazumi Kozaki; Atsushi Kaneda; Hajime Sugisaki; Hiroyuki Aburatani
Journal:  Hum Genet       Date:  2006-09-26       Impact factor: 4.132

8.  Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.

Authors:  Aravind Subramanian; Pablo Tamayo; Vamsi K Mootha; Sayan Mukherjee; Benjamin L Ebert; Michael A Gillette; Amanda Paulovich; Scott L Pomeroy; Todd R Golub; Eric S Lander; Jill P Mesirov
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-30       Impact factor: 11.205

9.  Krüppel-like transcription factor KLF5 is a key regulator of adipocyte differentiation.

Authors:  Yumiko Oishi; Ichiro Manabe; Kazuyuki Tobe; Kensuke Tsushima; Takayuki Shindo; Katsuhito Fujiu; Go Nishimura; Koji Maemura; Toshimasa Yamauchi; Naoto Kubota; Ryo Suzuki; Toshio Kitamura; Shizuo Akira; Takashi Kadowaki; Ryozo Nagai
Journal:  Cell Metab       Date:  2005-01       Impact factor: 27.287

10.  An integrated map of p53-binding sites and histone modification in the human ENCODE regions.

Authors:  Kiyofumi Kaneshiro; Shuichi Tsutsumi; Shingo Tsuji; Katsuhiko Shirahige; Hiroyuki Aburatani
Journal:  Genomics       Date:  2006-11-03       Impact factor: 5.736

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  103 in total

1.  Histone demethylase LSD1 regulates adipogenesis.

Authors:  Melina M Musri; Mari Carmen Carmona; Felicia A Hanzu; Perla Kaliman; Ramon Gomis; Marcelina Párrizas
Journal:  J Biol Chem       Date:  2010-07-23       Impact factor: 5.157

Review 2.  Role of histone methylation and demethylation in adipogenesis and obesity.

Authors:  Masashi Okamura; Takeshi Inagaki; Toshiya Tanaka; Juro Sakai
Journal:  Organogenesis       Date:  2010 Jan-Mar       Impact factor: 2.500

Review 3.  A chromatin perspective of adipogenesis.

Authors:  Melina M Musri; Ramon Gomis; Marcelina Párrizas
Journal:  Organogenesis       Date:  2010 Jan-Mar       Impact factor: 2.500

Review 4.  Forming functional fat: a growing understanding of adipocyte differentiation.

Authors:  Ana G Cristancho; Mitchell A Lazar
Journal:  Nat Rev Mol Cell Biol       Date:  2011-09-28       Impact factor: 94.444

Review 5.  Epigenetics and the developmental origins of lung disease.

Authors:  Lisa A Joss-Moore; Kurt H Albertine; Robert H Lane
Journal:  Mol Genet Metab       Date:  2011-07-23       Impact factor: 4.797

6.  Extensive chromatin remodelling and establishment of transcription factor 'hotspots' during early adipogenesis.

Authors:  Rasmus Siersbæk; Ronni Nielsen; Sam John; Myong-Hee Sung; Songjoon Baek; Anne Loft; Gordon L Hager; Susanne Mandrup
Journal:  EMBO J       Date:  2011-03-22       Impact factor: 11.598

7.  Histone H4 Lys 20 monomethylation by histone methylase SET8 mediates Wnt target gene activation.

Authors:  Zhenfei Li; Fen Nie; Sheng Wang; Lin Li
Journal:  Proc Natl Acad Sci U S A       Date:  2011-01-31       Impact factor: 11.205

8.  The transcription factor NKX1-2 promotes adipogenesis and may contribute to a balance between adipocyte and osteoblast differentiation.

Authors:  Noah Chen; Rebecca L Schill; Michael O'Donnell; Kevin Xu; Devika P Bagchi; Ormond A MacDougald; Ronald J Koenig; Bin Xu
Journal:  J Biol Chem       Date:  2019-10-15       Impact factor: 5.157

Review 9.  Epigenetic contributions to the developmental origins of adult lung disease.

Authors:  Lisa A Joss-Moore; Robert H Lane; Kurt H Albertine
Journal:  Biochem Cell Biol       Date:  2014-10-13       Impact factor: 3.626

10.  KMT5c modulates adipocyte thermogenesis by regulating Trp53 expression.

Authors:  Qingwen Zhao; Zhe Zhang; Weiqiong Rong; Weiwei Jin; Linyu Yan; Wenfang Jin; Yingjiang Xu; Xuan Cui; Qi-Qun Tang; Dongning Pan
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-24       Impact factor: 11.205

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