Literature DB >> 19414452

Modelling sarcoplasmic reticulum calcium ATPase and its regulation in cardiac myocytes.

Jussi T Koivumäki1, Jouni Takalo, Topi Korhonen, Pasi Tavi, Matti Weckström.   

Abstract

When developing large-scale mathematical models of physiology, some reduction in complexity is necessarily required to maintain computational efficiency. A prime example of such an intricate cell is the cardiac myocyte. For the predictive power of the cardiomyocyte models, it is vital to accurately describe the calcium transport mechanisms, since they essentially link the electrical activation to contractility. The removal of calcium from the cytoplasm takes place mainly by the Na(+)/Ca(2+) exchanger, and the sarcoplasmic reticulum Ca(2+) ATPase (SERCA). In the present study, we review the properties of SERCA, its frequency-dependent and beta-adrenergic regulation, and the approaches of mathematical modelling that have been used to investigate its function. Furthermore, we present novel theoretical considerations that might prove useful for the elucidation of the role of SERCA in cardiac function, achieving a reduction in model complexity, but at the same time retaining the central aspects of its function. Our results indicate that to faithfully predict the physiological properties of SERCA, we should take into account the calcium-buffering effect and reversible function of the pump. This 'uncomplicated' modelling approach could be useful to other similar transport mechanisms as well.

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Year:  2009        PMID: 19414452     DOI: 10.1098/rsta.2008.0304

Source DB:  PubMed          Journal:  Philos Trans A Math Phys Eng Sci        ISSN: 1364-503X            Impact factor:   4.226


  12 in total

1.  Calcium channel blockade in embryonic cardiac progenitor cells disrupts normal cardiac cell differentiation.

Authors:  Kaari L Linask; Kersti K Linask
Journal:  Stem Cells Dev       Date:  2010-09-11       Impact factor: 3.272

2.  Thermodynamics of Cation Binding to the Sarcoendoplasmic Reticulum Calcium ATPase Pump and Impacts on Enzyme Function.

Authors:  Bin Sun; Bradley D Stewart; Amir N Kucharski; Peter M Kekenes-Huskey
Journal:  J Chem Theory Comput       Date:  2019-03-13       Impact factor: 6.006

3.  Afterdepolarizations and abnormal calcium handling in atrial myocytes with modulated SERCA uptake: a sensitivity analysis of calcium handling channels.

Authors:  Andy C Y Lo; Jieyun Bai; Patrick A Gladding; Vadim V Fedorov; Jichao Zhao
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2020-05-25       Impact factor: 4.226

4.  Importance of Altered Levels of SERCA, IP3R, and RyR in Vascular Smooth Muscle Cell.

Authors:  Jaijus Pallippadan Johny; Michael J Plank; Tim David
Journal:  Biophys J       Date:  2017-01-24       Impact factor: 4.033

5.  Modeling CICR in rat ventricular myocytes: voltage clamp studies.

Authors:  Abhilash Krishna; Liang Sun; Miguel Valderrábano; Philip T Palade; John W Clark
Journal:  Theor Biol Med Model       Date:  2010-11-10       Impact factor: 2.432

6.  Impact of sarcoplasmic reticulum calcium release on calcium dynamics and action potential morphology in human atrial myocytes: a computational study.

Authors:  Jussi T Koivumäki; Topi Korhonen; Pasi Tavi
Journal:  PLoS Comput Biol       Date:  2011-01-27       Impact factor: 4.475

7.  Enhanced currents through L-type calcium channels in cardiomyocytes disturb the electrophysiology of the dystrophic heart.

Authors:  Xaver Koenig; Lena Rubi; Gerald J Obermair; Rene Cervenka; Xuan B Dang; Peter Lukacs; Stefan Kummer; Reginald E Bittner; Helmut Kubista; Hannes Todt; Karlheinz Hilber
Journal:  Am J Physiol Heart Circ Physiol       Date:  2013-12-13       Impact factor: 5.125

8.  In silico screening of the key cellular remodeling targets in chronic atrial fibrillation.

Authors:  Jussi T Koivumäki; Gunnar Seemann; Mary M Maleckar; Pasi Tavi
Journal:  PLoS Comput Biol       Date:  2014-05-22       Impact factor: 4.475

9.  Using Machine Learning to Characterize Atrial Fibrotic Substrate From Intracardiac Signals With a Hybrid in silico and in vivo Dataset.

Authors:  Jorge Sánchez; Giorgio Luongo; Mark Nothstein; Laura A Unger; Javier Saiz; Beatriz Trenor; Armin Luik; Olaf Dössel; Axel Loewe
Journal:  Front Physiol       Date:  2021-07-05       Impact factor: 4.566

Review 10.  Voltage-Dependent Sarcolemmal Ion Channel Abnormalities in the Dystrophin-Deficient Heart.

Authors:  Xaver Koenig; Janine Ebner; Karlheinz Hilber
Journal:  Int J Mol Sci       Date:  2018-10-23       Impact factor: 6.208

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