Literature DB >> 19411412

New insights into {gamma}-aminobutyric acid catabolism: Evidence for {gamma}-hydroxybutyric acid and polyhydroxybutyrate synthesis in Saccharomyces cerevisiae.

Benoît Bach1, Emmanuelle Meudec, Jean-Paul Lepoutre, Tristan Rossignol, Bruno Blondin, Sylvie Dequin, Carole Camarasa.   

Abstract

The gamma-aminobutyrate (GABA) shunt, an alternative route for the conversion of alpha-ketoglutarate to succinate, involves the glutamate decarboxylase Gad1p, the GABA transaminase Uga1p and the succinate semialdehyde dehydrogenase Uga2p. This pathway has been extensively described in plants and animals, but its function in yeast remains unclear. We show that the flux through Gad1p is insignificant during fermentation in rich sugar-containing medium, excluding a role for this pathway in redox homeostasis under anaerobic conditions or sugar stress. However, we found that up to 4 g of exogenous GABA/liter was efficiently consumed by yeast. We studied the fate of this consumed GABA. Most was converted into succinate, with a reaction yield of 0.7 mol/mol. We also showed that a large proportion of GABA was stored within cells, indicating a possible role for this molecule in stress tolerance mechanisms or nitrogen storage. Furthermore, based on enzymatic and metabolic evidence, we identified an alternative route for GABA catabolism, involving the reduction of succinate-semialdehyde into gamma-hydroxybutyric acid and the polymerization of gamma-hydroxybutyric acid to form poly-(3-hydroxybutyric acid-co-4-hydroxybutyric acid). This study provides the first demonstration of a native route for the formation of this polymer in yeast. Our findings shed new light on the GABA pathway and open up new opportunities for industrial applications.

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Year:  2009        PMID: 19411412      PMCID: PMC2704823          DOI: 10.1128/AEM.00051-09

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  47 in total

Review 1.  The fungal vacuole: composition, function, and biogenesis.

Authors:  D J Klionsky; P K Herman; S D Emr
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2.  Nucleotide sequence of the yeast UGA1 gene encoding GABA transaminase.

Authors:  B André; J C Jauniaux
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3.  GABA transport in Saccharomyces cerevisiae.

Authors:  J McKelvey; R Rai; T G Cooper
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6.  Production of poly(3-hydroxybutyrate-co-4-hydroxybutyrate) in recombinant Escherichia coli grown on glucose.

Authors:  H E Valentin; D Dennis
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7.  Genetic evidence for Gln3p-independent, nitrogen catabolite repression-sensitive gene expression in Saccharomyces cerevisiae.

Authors:  J A Coffman; R Rai; T G Cooper
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Journal:  Nucleic Acids Res       Date:  2006-03-03       Impact factor: 16.971

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Review 10.  The pleiotropic effects of the glutamate dehydrogenase (GDH) pathway in Saccharomyces cerevisiae.

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