Literature DB >> 19409785

Rapid and cost effective detection of small mutations in the DMD gene by high resolution melting curve analysis.

Rowida Almomani1, Nienke van der Stoep, Egbert Bakker, Johan T den Dunnen, Martijn H Breuning, Ieke B Ginjaar.   

Abstract

Duchenne/Becker muscular dystrophy (DMD/BMD) is caused by large deletions or duplications in two-thirds of the cases. The remaining one-third DMD patients have small mutations in the DMD gene. Screening for such small mutations is a daunting and costly task. High resolution melting curve analysis (HR-MCA) followed by sequencing for amplicons with altered melting profiles can be used to scan DNA for small alterations. We first validated the technique as screening procedure for the DMD gene and then screened a group of unrelated 22 DMD/BMD patients and 11 females. We managed to identify all previously found mutations by means of HR-MCA, which provided its validation. Furthermore, 17 different pathogenic mutations were found in the screening group, of which 10 were novel. Our results provide validation of HR-MCA as a powerful and inexpensive pre-sequencing scanning method. This technology is now ready for routine diagnostic use on DMD/BMD patients and female carriers.

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Year:  2009        PMID: 19409785     DOI: 10.1016/j.nmd.2009.03.004

Source DB:  PubMed          Journal:  Neuromuscul Disord        ISSN: 0960-8966            Impact factor:   4.296


  10 in total

1.  Evaluation of point mutations in dystrophin gene in Iranian Duchenne and Becker muscular dystrophy patients: introducing three novel variants.

Authors:  Maryam Haghshenas; Mohammad Taghi Akbari; Shohreh Zare Karizi; Faravareh Khordadpoor Deilamani; Shahriar Nafissi; Zivar Salehi
Journal:  J Genet       Date:  2016-06       Impact factor: 1.166

2.  MLPA Application in Clinical Diagnosis of DMD/BMD in Shanghai.

Authors:  Xing Ji; Jingmin Zhang; Yan Xu; Fei Long; Wei Sun; Xiaoqin Liu; Yingwei Chen; Wenting Jiang
Journal:  J Clin Lab Anal       Date:  2014-08-17       Impact factor: 2.352

3.  An urgent need for a change in policy revealed by a study on prenatal testing for Duchenne muscular dystrophy.

Authors:  Apollonia T J M Helderman-van den Enden; Kamlesh Madan; Martijn H Breuning; Annemieke H van der Hout; Egbert Bakker; Christine E M de Die-Smulders; Hendrika B Ginjaar
Journal:  Eur J Hum Genet       Date:  2012-06-06       Impact factor: 4.246

4.  High-resolution melting (HRM) re-analysis of a polyposis patients cohort reveals previously undetected heterozygous and mosaic APC gene mutations.

Authors:  Astrid A Out; Ivonne J H M van Minderhout; Nienke van der Stoep; Lysette S R van Bommel; Irma Kluijt; Cora Aalfs; Marsha Voorendt; Rolf H A M Vossen; Maartje Nielsen; Hans F A Vasen; Hans Morreau; Peter Devilee; Carli M J Tops; Frederik J Hes
Journal:  Fam Cancer       Date:  2015-06       Impact factor: 2.375

5.  The sensitivity of exome sequencing in identifying pathogenic mutations for LGMD in the United States.

Authors:  Hemakumar M Reddy; Kyung-Ah Cho; Monkol Lek; Elicia Estrella; Elise Valkanas; Michael D Jones; Satomi Mitsuhashi; Basil T Darras; Anthony A Amato; Hart Gw Lidov; Catherine A Brownstein; David M Margulies; Timothy W Yu; Mustafa A Salih; Louis M Kunkel; Daniel G MacArthur; Peter B Kang
Journal:  J Hum Genet       Date:  2016-10-06       Impact factor: 3.172

6.  Detection of SARS-CoV-2 spike protein D614G mutation by qPCR-HRM analysis.

Authors:  Faris Muhammad Gazali; Matin Nuhamunada; Rahma Nabilla; Endah Supriyati; Mohamad Saifudin Hakim; Eggi Arguni; Edwin Widyanto Daniwijaya; Titik Nuryastuti; Sofia Mubarika Haryana; Tri Wibawa; Nastiti Wijayanti
Journal:  Heliyon       Date:  2021-09-06

7.  A Streamlined Protocol for Molecular Testing of the DMD Gene within a Diagnostic Laboratory: A Combination of Array Comparative Genomic Hybridization and Bidirectional Sequence Analysis.

Authors:  Renate Marquis-Nicholson; Daniel Lai; Chuan-Ching Lan; Jennifer M Love; Donald R Love
Journal:  ISRN Neurol       Date:  2013-02-07

8.  Comparison of mutation profiles in the Duchenne muscular dystrophy gene among populations: implications for potential molecular therapies.

Authors:  Luz Berenice López-Hernández; Benjamín Gómez-Díaz; Alexandra Berenice Luna-Angulo; Mónica Anaya-Segura; David John Bunyan; Carolina Zúñiga-Guzman; Rosa Elena Escobar-Cedillo; Bladimir Roque-Ramírez; Luis Angel Ruano-Calderón; Héctor Rangel-Villalobos; Julia Angélica López-Hernández; Francisco Javier Estrada-Mena; Silvia García; Ramón Mauricio Coral-Vázquez
Journal:  Int J Mol Sci       Date:  2015-03-09       Impact factor: 5.923

9.  Duchenne muscular dystrophy caused by a frame-shift mutation in the acceptor splice site of intron 26.

Authors:  Mirella Meregalli; Simona Maciotta; Valentina Angeloni; Yvan Torrente
Journal:  BMC Med Genet       Date:  2016-08-11       Impact factor: 2.103

10.  Combining Protein Expression and Molecular Data Improves Mutation Characterization of Dystrophinopathies.

Authors:  Gisela Gaina; Rolf H A M Vossen; Emilia Manole; Doina Anca Plesca; Elena Ionica
Journal:  Front Neurol       Date:  2021-12-07       Impact factor: 4.003

  10 in total

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