Literature DB >> 19402027

Score test for age at onset genetic linkage analysis in selected sibling pairs.

A Callegaro1, H C van Houwelingen, J J Houwing-Duistermaat.   

Abstract

A new score statistic is derived, which uses information from registries (age-specific incidences) and family studies (sib-sib marginal correlation) to weight affected sibling pairs according to their age at onset. Age at onset of sibling pairs is modelled by a gamma frailty model. From this model we derive a bivariate survival function, which depends on the marginal survival and on the marginal correlation. The score statistic for linkage is a classical nonparametric linkage (NPL) statistic where the identical by descent sharing is weighted by a particular function of the age at onset data. Since the statistic is based on survival models, it can also be applied to discordant and healthy sibling pairs. Simulation studies show that the proposed method is robust and more powerful than standard NPL methods. As illustration we apply the new score statistic to data from a breast cancer study. Copyright (c) 2009 John Wiley & Sons, Ltd.

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Year:  2009        PMID: 19402027     DOI: 10.1002/sim.3596

Source DB:  PubMed          Journal:  Stat Med        ISSN: 0277-6715            Impact factor:   2.373


  4 in total

1.  Detecting genetic variants for extreme aging using multiple data sources.

Authors:  Jeanine J Houwing-Duistermaat
Journal:  Eur J Hum Genet       Date:  2012-08-15       Impact factor: 4.246

2.  Robust age at onset linkage analysis in nuclear families.

Authors:  Andrea Callegaro; J C van Houwelingen; J J Houwing-Duistermaat
Journal:  Hum Hered       Date:  2009-12-04       Impact factor: 0.444

3.  New score tests for age-at-onset linkage analysis in general pedigrees.

Authors:  Andrea Callegaro; Hae-Won Uh; Quinta Helmer; Jeanine J Houwing-Duistermaat
Journal:  BMC Proc       Date:  2009-12-15

4.  Genome-wide linkage analysis for human longevity: Genetics of Healthy Aging Study.

Authors:  Marian Beekman; Hélène Blanché; Markus Perola; Anti Hervonen; Vladyslav Bezrukov; Ewa Sikora; Friederike Flachsbart; Lene Christiansen; Anton J M De Craen; Tom B L Kirkwood; Irene Maeve Rea; Michel Poulain; Jean-Marie Robine; Silvana Valensin; Maria Antonietta Stazi; Giuseppe Passarino; Luca Deiana; Efstathios S Gonos; Lavinia Paternoster; Thorkild I A Sørensen; Qihua Tan; Quinta Helmer; Erik B van den Akker; Joris Deelen; Francesca Martella; Heather J Cordell; Kristin L Ayers; James W Vaupel; Outi Törnwall; Thomas E Johnson; Stefan Schreiber; Mark Lathrop; Axel Skytthe; Rudi G J Westendorp; Kaare Christensen; Jutta Gampe; Almut Nebel; Jeanine J Houwing-Duistermaat; Pieternella Eline Slagboom; Claudio Franceschi
Journal:  Aging Cell       Date:  2013-02-06       Impact factor: 9.304

  4 in total

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