Literature DB >> 19401470

Exosite determinants of serpin specificity.

Peter G W Gettins1, Steven T Olson.   

Abstract

Serpins form an enormous superfamily of 40-60-kDa proteins found in almost all types of organisms, including humans. Most are one-use suicide substrate serine and cysteine proteinase inhibitors that have evolved to finely regulate complex proteolytic pathways, such as blood coagulation, fibrinolysis, and inflammation. Despite distinct functions for each serpin, there is much redundancy in the primary specificity-determining residues. However, many serpins exploit additional exosites to generate the exquisite specificity that makes a given serpin effective only when certain other criteria, such as the presence of specific cofactors, are met. With a focus on human serpins, this minireview examines use of exosites by nine serpins in the initial complex-forming phase to modulate primary specificity in either binary serpin-proteinase complexes or ternary complexes that additionally employ a protein or other cofactor. A frequent theme is down-regulation of inhibitory activity unless the exosite(s) are engaged. In addition, the use of exosites by maspin and plasminogen activator inhibitor-1 to indirectly affect proteolytic processes is considered.

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Year:  2009        PMID: 19401470      PMCID: PMC2742806          DOI: 10.1074/jbc.R800064200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  47 in total

1.  Phylogeny of the serpin superfamily: implications of patterns of amino acid conservation for structure and function.

Authors:  J A Irving; R N Pike; A M Lesk; J C Whisstock
Journal:  Genome Res       Date:  2000-12       Impact factor: 9.043

2.  Evolution of serpin specificity: cooperative interactions in the reactive-site loop sequence of antithrombin specifically restrict the inhibition of activated protein C.

Authors:  P C Hopkins; R N Pike; S R Stone
Journal:  J Mol Evol       Date:  2000-11       Impact factor: 2.395

Review 3.  Role of induced fit in enzyme specificity: a molecular forward/reverse switch.

Authors:  Kenneth A Johnson
Journal:  J Biol Chem       Date:  2008-06-10       Impact factor: 5.157

4.  A positively charged loop on the surface of kallistatin functions to enhance tissue kallikrein inhibition by acting as a secondary binding site for kallikrein.

Authors:  V C Chen; L Chao; J Chao
Journal:  J Biol Chem       Date:  2000-12-22       Impact factor: 5.157

5.  The conformational activation of antithrombin. A 2.85-A structure of a fluorescein derivative reveals an electrostatic link between the hinge and heparin binding regions.

Authors:  J A Huntington; A McCoy; K J Belzar; X Y Pei; P G Gettins; R W Carrell
Journal:  J Biol Chem       Date:  2000-05-19       Impact factor: 5.157

6.  The variable region-1 from tissue-type plasminogen activator confers specificity for plasminogen activator inhibitor-1 to thrombin by facilitating catalysis: release of a kinetic block by a heterologous protein surface loop.

Authors:  R J Dekker; A Eichinger; A A Stoop; W Bode; H Pannekoek; A J Horrevoets
Journal:  J Mol Biol       Date:  1999-10-29       Impact factor: 5.469

7.  SERPIN regulation of factor XIa. The novel observation that protease nexin 1 in the presence of heparin is a more potent inhibitor of factor XIa than C1 inhibitor.

Authors:  D J Knauer; D Majumdar; P C Fong; M F Knauer
Journal:  J Biol Chem       Date:  2000-12-01       Impact factor: 5.157

8.  Characterization of the protein Z-dependent protease inhibitor.

Authors:  X Han; R Fiehler; G J Broze
Journal:  Blood       Date:  2000-11-01       Impact factor: 22.113

9.  Conformational changes in serpins: II. The mechanism of activation of antithrombin by heparin.

Authors:  J C Whisstock; R N Pike; L Jin; R Skinner; X Y Pei; R W Carrell; A M Lesk
Journal:  J Mol Biol       Date:  2000-09-01       Impact factor: 5.469

10.  Kinetic characterization of the protein Z-dependent protease inhibitor reaction with blood coagulation factor Xa.

Authors:  Xin Huang; Richard Swanson; George J Broze; Steven T Olson
Journal:  J Biol Chem       Date:  2008-09-03       Impact factor: 5.157

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  35 in total

1.  Polyphosphate elicits pro-inflammatory responses that are counteracted by activated protein C in both cellular and animal models.

Authors:  J-S Bae; W Lee; A R Rezaie
Journal:  J Thromb Haemost       Date:  2012-06       Impact factor: 5.824

Review 2.  Serpins flex their muscle: II. Structural insights into target peptidase recognition, polymerization, and transport functions.

Authors:  James C Whisstock; Gary A Silverman; Phillip I Bird; Stephen P Bottomley; Dion Kaiserman; Cliff J Luke; Stephen C Pak; Jean-Marc Reichhart; James A Huntington
Journal:  J Biol Chem       Date:  2010-05-24       Impact factor: 5.157

Review 3.  Serpins flex their muscle: I. Putting the clamps on proteolysis in diverse biological systems.

Authors:  Gary A Silverman; James C Whisstock; Stephen P Bottomley; James A Huntington; Dion Kaiserman; Cliff J Luke; Stephen C Pak; Jean-Marc Reichhart; Phillip I Bird
Journal:  J Biol Chem       Date:  2010-05-24       Impact factor: 5.157

4.  Identification of serpin determinants of specificity and selectivity for furin inhibition through studies of α1PDX (α1-protease inhibitor Portland)-serpin B8 and furin active-site loop chimeras.

Authors:  Gonzalo Izaguirre; Lixin Qi; Mary Lima; Steven T Olson
Journal:  J Biol Chem       Date:  2013-06-06       Impact factor: 5.157

5.  Extending the cellulosome paradigm: the modular Clostridium thermocellum cellulosomal serpin PinA is a broad-spectrum inhibitor of subtilisin-like proteases.

Authors:  Páraic O Cuív; Rajesh Gupta; Hareshwar P Goswami; Mark Morrison
Journal:  Appl Environ Microbiol       Date:  2013-07-19       Impact factor: 4.792

6.  Inhibitory properties of the P1 Tyr variant of antithrombin.

Authors:  Likui Yang; Chandrashekhara Manithody; Shabir H Qureshi; Alireza R Rezaie
Journal:  Biochemistry       Date:  2010-03-30       Impact factor: 3.162

7.  Role of the residues of the 39-loop in determining the substrate and inhibitor specificity of factor IXa.

Authors:  Likui Yang; Chandrashekhara Manithody; Shabir H Qureshi; Alireza R Rezaie
Journal:  J Biol Chem       Date:  2010-07-13       Impact factor: 5.157

8.  Identification of Serpinb6b as a species-specific mouse granzyme A inhibitor suggests functional divergence between human and mouse granzyme A.

Authors:  Dion Kaiserman; Sarah E Stewart; Kim Plasman; Kris Gevaert; Petra Van Damme; Phillip I Bird
Journal:  J Biol Chem       Date:  2014-02-06       Impact factor: 5.157

9.  Basic Residues of β-Sheet A Contribute to Heparin Binding and Activation of Vaspin (Serpin A12).

Authors:  David Ulbricht; Kathrin Oertwig; Kristin Arnsburg; Anja Saalbach; Jan Pippel; Norbert Sträter; John T Heiker
Journal:  J Biol Chem       Date:  2016-12-09       Impact factor: 5.157

10.  Sucrose octasulfate selectively accelerates thrombin inactivation by heparin cofactor II.

Authors:  Suryakala Sarilla; Sally Y Habib; Dmitri V Kravtsov; Anton Matafonov; David Gailani; Ingrid M Verhamme
Journal:  J Biol Chem       Date:  2010-01-06       Impact factor: 5.157

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