Literature DB >> 19398022

TIMER: tensor image morphing for elastic registration.

Pew-Thian Yap1, Guorong Wu, Hongtu Zhu, Weili Lin, Dinggang Shen.   

Abstract

We propose a novel diffusion tensor imaging (DTI) registration algorithm, called Tensor Image Morphing for Elastic Registration (TIMER), which leverages the hierarchical guidance of regional distributions and local boundaries, both extracted directly from the tensors. Currently available DTI registration methods generally extract tensor scalar features from each tensor to construct scalar maps. Subsequently, regional integration and other operations such as edge detection are performed to extract more features to guide the registration. However, there are two major limitations with these approaches. First, the computed regional features might not reflect the actual regional tensor distributions. Second, by the same token, gradient maps calculated from the tensor-derived scalar feature maps might not represent the actual tissue tensor boundaries. To overcome these limitations, we propose a new approach which extracts regional and edge information directly from a tensor neighborhood. Regional tensor distribution information, such as mean and variance, is computed in a multiscale fashion directly from the tensors by taking into account the voxel neighborhood of different sizes, and hence capturing tensor information at different scales, which in turn can be employed to hierarchically guide the registration. Such multiscale scheme can help alleviate the problem of local minimum and is also more robust to noise since one can better determine the statistical properties of each voxel by taking into account the properties of its surrounding. Also incorporated in our method is edge information extracted directly from the tensors, which is crucial to facilitate registration of tissue boundaries. Experiments involving real subjects, simulated subjects, fiber tracking, and atrophy detection indicate that TIMER performs better than the other methods (Yang et al., 2008; Zhang et al., 2006).

Entities:  

Mesh:

Year:  2009        PMID: 19398022      PMCID: PMC2700196          DOI: 10.1016/j.neuroimage.2009.04.055

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  23 in total

1.  Diffusion tensor imaging of the developing mouse brain.

Authors:  S Mori; R Itoh; J Zhang; W E Kaufmann; P C van Zijl; M Solaiyappan; P Yarowsky
Journal:  Magn Reson Med       Date:  2001-07       Impact factor: 4.668

Review 2.  Processing and visualization for diffusion tensor MRI.

Authors:  C-F Westin; S E Maier; H Mamata; A Nabavi; F A Jolesz; R Kikinis
Journal:  Med Image Anal       Date:  2002-06       Impact factor: 8.545

3.  Diffusion tensor MR imaging of the human brain.

Authors:  C Pierpaoli; P Jezzard; P J Basser; A Barnett; G Di Chiro
Journal:  Radiology       Date:  1996-12       Impact factor: 11.105

4.  A sparse texture representation using local affine regions.

Authors:  Svetlana Lazebnik; Cordelia Schmid; Jean Ponce
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2005-08       Impact factor: 6.226

5.  Log-Euclidean metrics for fast and simple calculus on diffusion tensors.

Authors:  Vincent Arsigny; Pierre Fillard; Xavier Pennec; Nicholas Ayache
Journal:  Magn Reson Med       Date:  2006-08       Impact factor: 4.668

6.  Simulating deformations of MR brain images for validation of atlas-based segmentation and registration algorithms.

Authors:  Zhong Xue; Dinggang Shen; Bilge Karacali; Joshua Stern; David Rottenberg; Christos Davatzikos
Journal:  Neuroimage       Date:  2006-09-25       Impact factor: 6.556

7.  Diffusion tensor image registration using tensor geometry and orientation features.

Authors:  Jinzhong Yang; Dinggang Shen; Christos Davatzikos; Ragini Verma
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

8.  A computational approach to edge detection.

Authors:  J Canny
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  1986-06       Impact factor: 6.226

9.  Microstructural and physiological features of tissues elucidated by quantitative-diffusion-tensor MRI.

Authors:  P J Basser; C Pierpaoli
Journal:  J Magn Reson B       Date:  1996-06

10.  White and gray matter development in human fetal, newborn and pediatric brains.

Authors:  Hao Huang; Jiangyang Zhang; Setsu Wakana; Weihong Zhang; Tianbo Ren; Linda J Richards; Paul Yarowsky; Pamela Donohue; Ernest Graham; Peter C M van Zijl; Susumu Mori
Journal:  Neuroimage       Date:  2006-08-14       Impact factor: 6.556

View more
  29 in total

1.  DRAMMS: Deformable registration via attribute matching and mutual-saliency weighting.

Authors:  Yangming Ou; Aristeidis Sotiras; Nikos Paragios; Christos Davatzikos
Journal:  Med Image Anal       Date:  2010-07-17       Impact factor: 8.545

2.  Individual functional ROI optimization via maximization of group-wise consistency of structural and functional profiles.

Authors:  Kaiming Li; Lei Guo; Dajiang Zhu; Xintao Hu; Junwei Han; Tianming Liu
Journal:  Neuroinformatics       Date:  2012-07

3.  Hierarchical and symmetric infant image registration by robust longitudinal-example-guided correspondence detection.

Authors:  Yao Wu; Guorong Wu; Li Wang; Brent C Munsell; Qian Wang; Weili Lin; Qianjin Feng; Wufan Chen; Dinggang Shen
Journal:  Med Phys       Date:  2015-07       Impact factor: 4.071

4.  Neonatal atlas construction using sparse representation.

Authors:  Feng Shi; Li Wang; Guorong Wu; Gang Li; John H Gilmore; Weili Lin; Dinggang Shen
Journal:  Hum Brain Mapp       Date:  2014-03-17       Impact factor: 5.038

5.  Multi-atlas based representations for Alzheimer's disease diagnosis.

Authors:  Rui Min; Guorong Wu; Jian Cheng; Qian Wang; Dinggang Shen
Journal:  Hum Brain Mapp       Date:  2014-04-18       Impact factor: 5.038

6.  Spatio-angular consistent construction of neonatal diffusion MRI atlases.

Authors:  Behrouz Saghafi; Jaeil Kim; Geng Chen; Feng Shi; Weili Lin; Pew-Thian Yap; Dinggang Shen
Journal:  Hum Brain Mapp       Date:  2017-03-27       Impact factor: 5.038

7.  Uncertainty estimation in diffusion MRI using the nonlocal bootstrap.

Authors:  Pew-Thian Yap; Hongyu An; Yasheng Chen; Dinggang Shen
Journal:  IEEE Trans Med Imaging       Date:  2014-04-29       Impact factor: 10.048

8.  Learning-based deformable registration for infant MRI by integrating random forest with auto-context model.

Authors:  Lifang Wei; Xiaohuan Cao; Zhensong Wang; Yaozong Gao; Shunbo Hu; Li Wang; Guorong Wu; Dinggang Shen
Journal:  Med Phys       Date:  2017-10-19       Impact factor: 4.071

9.  Technical and organizational considerations for the long-term maintenance and development of digital brain atlases and web-based databases.

Authors:  Kei Ito
Journal:  Front Syst Neurosci       Date:  2010-06-18

10.  Diffusion tensor image registration using hybrid connectivity and tensor features.

Authors:  Qian Wang; Pew-Thian Yap; Guorong Wu; Dinggang Shen
Journal:  Hum Brain Mapp       Date:  2013-11-30       Impact factor: 5.038

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.