Literature DB >> 1939603

Simulation of stochastic processes in motile crossbridge systems.

E Pate1, R Cooke.   

Abstract

The underlying stochastic nature of many models of the actomyosin interaction should result in fluctuations in both force and shortening velocity. In classical experimental approaches involving intact or glycerinated muscle preparations these fluctuations are too small to resolve owing to the large numbers of crossbridges involved. However, new experimental techniques allow mechanical measurements to be made in systems in which small numbers of myosin heads act on a single actin filament, or small numbers of kinesin molecules act on a single tubulin filament. In these systems, stochastic effects should be evident. To understand better the nature of the expected stochastic effects, we have used computer simulation to investigate the fluctuations predicted by the original model for muscle crossbridge mechanics proposed by A.F. Huxley. We consider three situations: (1) the translation of actin or tubulin filaments by myosin or kinesin motors immobilized on a fixed substrate, (2) the production of tension by ensembles of immobilized myosin which involve the displacement of an elastic load, and (3) the fluctuations in axial displacement of a single, bipolar myosin thick filament interacting with actin filaments as in a sarcomere. In all three cases, fluctuations are clearly evident in simulations involving small numbers of motors. For case (1), we show that translation velocities can vary with crossbridge density. Whether one motor translates a filament faster, slower or at the same speed as many motors depends on the relative magnitudes of the attachment and detachment rate functions. Analytical expressions are provided to quantitate this relationship. For case (2), we show that fluctuations predicted assuming perfectly isometric conditions differ form those observed when the 'isometric state' is achieved against an elastic load. 'Elastic damping' of the fluctuations in the system results from the presence of many attached motors. In case (3) we show that in spite of the presence of stochastic fluctuations which can destabilize the uniformity of filament overlap in a sarcomere, the magnitude of thick filament displacement is less than might be anticipated over time periods of in vivo contraction. Taken together, these simulations allow one to better interpret experimental data in terms of current models of motor function.

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Year:  1991        PMID: 1939603     DOI: 10.1007/bf01738593

Source DB:  PubMed          Journal:  J Muscle Res Cell Motil        ISSN: 0142-4319            Impact factor:   2.698


  31 in total

1.  ELECTRON MICROSCOPE STUDIES ON THE STRUCTURE OF NATURAL AND SYNTHETIC PROTEIN FILAMENTS FROM STRIATED MUSCLE.

Authors:  H E HUXLEY
Journal:  J Mol Biol       Date:  1963-09       Impact factor: 5.469

2.  Fluorescent actin filaments move on myosin fixed to a glass surface.

Authors:  S J Kron; J A Spudich
Journal:  Proc Natl Acad Sci U S A       Date:  1986-09       Impact factor: 11.205

3.  Rate of force generation in muscle: correlation with actomyosin ATPase activity in solution.

Authors:  B Brenner; E Eisenberg
Journal:  Proc Natl Acad Sci U S A       Date:  1986-05       Impact factor: 11.205

4.  The effect of cross-bridge clustering and head-head competition on the mechanical response of skeletal muscle under equilibrium conditions.

Authors:  A Tözeren; M Schoenberg
Journal:  Biophys J       Date:  1986-11       Impact factor: 4.033

Review 5.  The mechanism of muscle contraction.

Authors:  R Cooke
Journal:  CRC Crit Rev Biochem       Date:  1986

Review 6.  Pathway of the microtubule-dynein ATPase and the structure of dynein: a comparison with actomyosin.

Authors:  K A Johnson
Journal:  Annu Rev Biophys Biophys Chem       Date:  1985

7.  Myosin subfragment-1 is sufficient to move actin filaments in vitro.

Authors:  Y Y Toyoshima; S J Kron; E M McNally; K R Niebling; C Toyoshima; J A Spudich
Journal:  Nature       Date:  1987 Aug 6-12       Impact factor: 49.962

8.  A model of crossbridge action: the effects of ATP, ADP and Pi.

Authors:  E Pate; R Cooke
Journal:  J Muscle Res Cell Motil       Date:  1989-06       Impact factor: 2.698

9.  Isolated beta-heavy chain subunit of dynein translocates microtubules in vitro.

Authors:  W S Sale; L A Fox
Journal:  J Cell Biol       Date:  1988-11       Impact factor: 10.539

10.  Phosphate starvation and the nonlinear dynamics of insect fibrillar flight muscle.

Authors:  D C White; J Thorson
Journal:  J Gen Physiol       Date:  1972-09       Impact factor: 4.086

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  13 in total

1.  Protein-protein ratchets: stochastic simulation and application to processive enzymes.

Authors:  C J Brokaw
Journal:  Biophys J       Date:  2001-09       Impact factor: 4.033

2.  Fluctuations and randomness of movement of the bead powered by a single kinesin molecule in a force-clamped motility assay: Monte Carlo simulations.

Authors:  Yi-der Chen; Bo Yan; Robert J Rubin
Journal:  Biophys J       Date:  2002-11       Impact factor: 4.033

Review 3.  Myosin step size: estimates from motility assays and shortening muscle.

Authors:  K Burton
Journal:  J Muscle Res Cell Motil       Date:  1992-12       Impact factor: 2.698

4.  Direct tests of muscle cross-bridge theories: predictions of a Brownian dumbbell model for position-dependent cross-bridge lifetimes and step sizes with an optically trapped actin filament.

Authors:  D A Smith
Journal:  Biophys J       Date:  1998-12       Impact factor: 4.033

5.  In vitro actin filament sliding velocities produced by mixtures of different types of myosin.

Authors:  G Cuda; E Pate; R Cooke; J R Sellers
Journal:  Biophys J       Date:  1997-04       Impact factor: 4.033

6.  Mechanical coupling between myosin molecules causes differences between ensemble and single-molecule measurements.

Authors:  Sam Walcott; David M Warshaw; Edward P Debold
Journal:  Biophys J       Date:  2012-08-08       Impact factor: 4.033

7.  Weakly-coupled models for motor enzyme function.

Authors:  C J Brokaw
Journal:  J Muscle Res Cell Motil       Date:  1995-06       Impact factor: 2.698

8.  High-resolution tracking of microtubule motility driven by a single kinesin motor.

Authors:  F Malik; D Brillinger; R D Vale
Journal:  Proc Natl Acad Sci U S A       Date:  1994-05-10       Impact factor: 11.205

9.  Temperature dependence of the inhibitory effects of orthovanadate on shortening velocity in fast skeletal muscle.

Authors:  E Pate; G J Wilson; M Bhimani; R Cooke
Journal:  Biophys J       Date:  1994-05       Impact factor: 4.033

10.  Robust mechanobiological behavior emerges in heterogeneous myosin systems.

Authors:  Paul F Egan; Jeffrey R Moore; Allen J Ehrlicher; David A Weitz; Christian Schunn; Jonathan Cagan; Philip LeDuc
Journal:  Proc Natl Acad Sci U S A       Date:  2017-09-12       Impact factor: 11.205

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