Literature DB >> 19395565

Archaeal diversity and the prevalence of Crenarchaeota in salt marsh sediments.

Katelyn A Nelson1, Nicole S Moin, Anne E Bernhard.   

Abstract

Crenarchaeal 16S rRNA sequences constituted over 70% of the archaeal clones recovered from three salt marsh sites dominated by different grasses. Group I.1a Crenarchaeota dominated at two sites, while group I.3b Crenarchaeota sequences were most abundant at a third site. Abundances of 16S rRNA genes related to "Candidatus Nitrosopumilus maritimus" differed by site and sampling date.

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Year:  2009        PMID： 19395565      PMCID： PMC2698360          DOI： 10.1128/AEM.00201-09

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  10 in total

1.  Archaeaplankton in the Columbia River, its estuary and the adjacent coastal ocean, USA.

Authors: 
Journal:  FEMS Microbiol Ecol       Date:  2000-03-01       Impact factor: 4.194

2.  Archaeal dominance in the mesopelagic zone of the Pacific Ocean.

Authors:  M B Karner; E F DeLong; D M Karl
Journal:  Nature       Date:  2001-01-25       Impact factor: 49.962

3.  Crenarchaeota and Euryarchaeota in temperate estuarine sediments.

Authors:  C Abreu; G Jurgens; P De Marco; A Saano; A A Bordalo
Journal:  J Appl Microbiol       Date:  2001-05       Impact factor: 3.772

4.  Salinity decreases nitrite reductase gene diversity in denitrifying bacteria of wastewater treatment systems.

Authors:  Sachiko Yoshie; Naohiro Noda; Satoshi Tsuneda; Akira Hirata; Yuhei Inamori
Journal:  Appl Environ Microbiol       Date:  2004-05       Impact factor: 4.792

5.  Isolation of an autotrophic ammonia-oxidizing marine archaeon.

Authors:  Martin Könneke; Anne E Bernhard; José R de la Torre; Christopher B Walker; John B Waterbury; David A Stahl
Journal:  Nature       Date:  2005-09-22       Impact factor: 49.962

6.  Microbial community dynamics based on 16S rRNA gene profiles in a Pacific Northwest estuary and its tributaries.

Authors:  Anne E Bernhard; Debbie Colbert; James McManus; Katharine G Field
Journal:  FEMS Microbiol Ecol       Date:  2004-12-19       Impact factor: 4.194

7.  Archaea in coastal marine environments.

Authors:  E F DeLong
Journal:  Proc Natl Acad Sci U S A       Date:  1992-06-15       Impact factor: 11.205

8.  Phylogenetic diversity of Archaea in sediment samples from a coastal salt marsh.

Authors:  M A Munson; D B Nedwell; T M Embley
Journal:  Appl Environ Microbiol       Date:  1997-12       Impact factor: 4.792

9.  Loss of diversity of ammonia-oxidizing bacteria correlates with increasing salinity in an estuary system.

Authors:  Anne E Bernhard; Thomas Donn; Anne E Giblin; David A Stahl
Journal:  Environ Microbiol       Date:  2005-09       Impact factor: 5.491

10.  Oxygen Deficiency in Spartina alterniflora Roots: Metabolic Adaptation to Anoxia.

Authors:  I A Mendelssohn; K L McKee; W H Patrick
Journal:  Science       Date:  1981-10-23       Impact factor: 47.728
  10 in total
  17 in total

1.  Comparative analysis of 16S rRNA and amoA genes from archaea selected with organic and inorganic amendments in enrichment culture.

Authors:  Mouzhong Xu; Jon Schnorr; Brandon Keibler; Holly M Simon
Journal:  Appl Environ Microbiol       Date:  2012-01-20       Impact factor: 4.792

2.  Communities of ammonia oxidizers at different stages of Spartina alterniflora invasion in salt marshes of Yangtze River estuary.

Authors:  Fei Xia; Jemaneh Zeleke; Qiang Sheng; Ji-Hua Wu; Zhe-Xue Quan
Journal:  J Microbiol       Date:  2015-05-03       Impact factor: 3.422

3.  Abundance of ammonia-oxidizing archaea and bacteria along an estuarine salinity gradient in relation to potential nitrification rates.

Authors:  Anne E Bernhard; Zachary C Landry; Alison Blevins; José R de la Torre; Anne E Giblin; David A Stahl
Journal:  Appl Environ Microbiol       Date:  2009-12-28       Impact factor: 4.792

4.  Distribution and diversity of archaeal and bacterial ammonia oxidizers in salt marsh sediments.

Authors:  Nicole S Moin; Katelyn A Nelson; Alexander Bush; Anne E Bernhard
Journal:  Appl Environ Microbiol       Date:  2009-10-02       Impact factor: 4.792

5.  Archaeal and bacterial communities respond differently to environmental gradients in anoxic sediments of a California hypersaline lake, the Salton Sea.

Authors:  Brandon K Swan; Christopher J Ehrhardt; Kristen M Reifel; Lilliana I Moreno; David L Valentine
Journal:  Appl Environ Microbiol       Date:  2009-11-30       Impact factor: 4.792

Review 6.  Microbial ecology of the dark ocean above, at, and below the seafloor.

Authors:  Beth N Orcutt; Jason B Sylvan; Nina J Knab; Katrina J Edwards
Journal:  Microbiol Mol Biol Rev       Date:  2011-06       Impact factor: 11.056

7.  Taxonomic and functional metagenomic profiling of the microbial community in the anoxic sediment of a sub-saline shallow lake (Laguna de Carrizo, Central Spain).

Authors:  Manuel Ferrer; María-Eugenia Guazzaroni; Michael Richter; Adela García-Salamanca; Pablo Yarza; Ana Suárez-Suárez; Jennifer Solano; María Alcaide; Pieter van Dillewijn; Maria Antonia Molina-Henares; Nieves López-Cortés; Yamal Al-Ramahi; Carmen Guerrero; Alejandro Acosta; Laura I de Eugenio; Virginia Martínez; Silvia Marques; Fernando Rojo; Eduardo Santero; Olga Genilloud; Julian Pérez-Pérez; Ramón Rosselló-Móra; Juan Luis Ramos
Journal:  Microb Ecol       Date:  2011-07-07       Impact factor: 4.552

8.  Ammonia oxidation coupled to CO2 fixation by archaea and bacteria in an agricultural soil.

Authors:  Jennifer Pratscher; Marc G Dumont; Ralf Conrad
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-22       Impact factor: 11.205

9.  Crenarchaeal heterotrophy in salt marsh sediments.

Authors:  Lauren M Seyler; Lora M McGuinness; Lee J Kerkhof
Journal:  ISME J       Date:  2014-02-20       Impact factor: 10.302

10.  Comparative genomics reveals adaptations of a halotolerant thaumarchaeon in the interfaces of brine pools in the Red Sea.

Authors:  David Kamanda Ngugi; Jochen Blom; Intikhab Alam; Mamoon Rashid; Wail Ba-Alawi; Guishan Zhang; Tyas Hikmawan; Yue Guan; Andre Antunes; Rania Siam; Hamza El Dorry; Vladimir Bajic; Ulrich Stingl
Journal:  ISME J       Date:  2014-08-08       Impact factor: 10.302
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