Literature DB >> 19395380

Zinc ion-induced domain organization in metallo-beta-lactamases: a flexible "zinc arm" for rapid metal ion transfer?

Nathalie Selevsek1, Sandrine Rival, Andreas Tholey, Elmar Heinzle, Uwe Heinz, Lars Hemmingsen, Hans W Adolph.   

Abstract

The reversible unfolding of metallo-beta-lactamase from Chryseobacterium meningosepticum (BlaB) by guanidinium hydrochloride is best described by a three-state model including folded, intermediate, and unfolded states. The transformation of the folded apoenzyme into the intermediate state requires only very low denaturant concentrations, in contrast to the Zn2-enzyme. Similarly, circular dichroism spectra of both BlaB and metallo-beta-lactamase from Bacillus cereus 569/H/9 (BcII) display distinct differences between metal-free and Zn2-enzymes, indicating that the zinc ions affect the folding of the proteins, giving a larger alpha-helix content. To identify the regions of the protein involved in this zinc ion-induced change, a hydrogen deuterium exchange study with matrix-assisted laser desorption ionization tandem time of flight mass spectrometry on metal-free and Zn1- and Zn2-BcII was carried out. The region spanning the metal binding metallo-beta-lactamases (MBL) superfamily consensus sequence His-X-His-X-Asp motif and the loop connecting the N- and C-terminal domains of the protein undergoes a zinc ion-dependent structural change between intrinsically disordered and ordered states. The inherent flexibility even appears to allow for the formation of metal ion-bridged protein-protein complexes which may account for both electrospray ionization-mass spectroscopy results obtained upon variation of the zinc/protein ratio and stoichiometry-dependent variations of 199mHg-perturbed angular correlation of gamma-rays spectroscopic data. We suggest that this flexible "zinc arm" motif, present in all the MBL subclasses, is disordered in metal-free MBLs and may be involved in metal ion acquisition from zinc-carrying molecules different from MBL in an "activation on demand" regulation of enzyme activity.

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Year:  2009        PMID: 19395380      PMCID: PMC2713538          DOI: 10.1074/jbc.M109.001305

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  48 in total

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Authors:  Lars Hemmingsen; Klára Nárcisz Sas; Eva Danielsen
Journal:  Chem Rev       Date:  2004-09       Impact factor: 60.622

2.  Zn(II) dependence of the Aeromonas hydrophila AE036 metallo-beta-lactamase activity and stability.

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Journal:  Biochemistry       Date:  1997-09-23       Impact factor: 3.162

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Journal:  Methods Enzymol       Date:  1986       Impact factor: 1.600

4.  Unfolding free energy changes determined by the linear extrapolation method. 1. Unfolding of phenylmethanesulfonyl alpha-chymotrypsin using different denaturants.

Authors:  M M Santoro; D W Bolen
Journal:  Biochemistry       Date:  1988-10-18       Impact factor: 3.162

5.  The protein conformation of Cd-substituted horse liver alcohol dehydrogenase and its metal-site coordination geometry in binary and ternary inhibitor complexes.

Authors:  L Hemmingsen; R Bauer; M J Bjerrum; H W Adolph; M Zeppezauer; E Cedergren-Zeppezauer
Journal:  Eur J Biochem       Date:  1996-10-15

6.  In vivo folding of recombinant metallo-beta-lactamase L1 requires the presence of Zn(II).

Authors:  Gopalraj Periyannan; Patrick J Shaw; Tara Sigdel; Michael W Crowder
Journal:  Protein Sci       Date:  2004-07-06       Impact factor: 6.725

7.  Protein disorder prediction: implications for structural proteomics.

Authors:  Rune Linding; Lars Juhl Jensen; Francesca Diella; Peer Bork; Toby J Gibson; Robert B Russell
Journal:  Structure       Date:  2003-11       Impact factor: 5.006

8.  Perturbation of a tertiary hydrogen bond in barstar by mutagenesis of the sole His residue to Gln leads to accumulation of at least one equilibrium folding intermediate.

Authors:  U Nath; J B Udgaonkar
Journal:  Biochemistry       Date:  1995-02-07       Impact factor: 3.162

9.  beta-Lactamase ragged ends detected by electrospray mass spectrometry correlates poorly with multiple banding on isoelectric focusing.

Authors:  D J Payne; P W Skett; R T Aplin; C V Robinson; D J Knowles
Journal:  Biol Mass Spectrom       Date:  1994-03

Review 10.  Beta-lactamases and bacterial resistance to antibiotics.

Authors:  J M Frère
Journal:  Mol Microbiol       Date:  1995-05       Impact factor: 3.501

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  7 in total

1.  The Role of Active Site Flexible Loops in Catalysis and of Zinc in Conformational Stability of Bacillus cereus 569/H/9 β-Lactamase.

Authors:  Caroline Montagner; Michaël Nigen; Olivier Jacquin; Nicolas Willet; Mireille Dumoulin; Andreas Ioannis Karsisiotis; Gordon C K Roberts; Christian Damblon; Christina Redfield; André Matagne
Journal:  J Biol Chem       Date:  2016-05-27       Impact factor: 5.157

2.  Plasticity of cytochrome P450 2B4 as investigated by hydrogen-deuterium exchange mass spectrometry and X-ray crystallography.

Authors:  P Ross Wilderman; Manish B Shah; Tong Liu; Sheng Li; Simon Hsu; Arthur G Roberts; David R Goodlett; Qinghai Zhang; Virgil L Woods; C David Stout; James R Halpert
Journal:  J Biol Chem       Date:  2010-09-28       Impact factor: 5.157

3.  Mutagenesis of zinc ligand residue Cys221 reveals plasticity in the IMP-1 metallo-β-lactamase active site.

Authors:  Lori B Horton; Sreejesh Shanker; Rose Mikulski; Nicholas G Brown; Kevin J Phillips; Ernest Lykissa; B V Venkataram Prasad; Timothy Palzkill
Journal:  Antimicrob Agents Chemother       Date:  2012-08-20       Impact factor: 5.191

Review 4.  Metallo-β-lactamases in the Age of Multidrug Resistance: From Structure and Mechanism to Evolution, Dissemination, and Inhibitor Design.

Authors:  Guillermo Bahr; Lisandro J González; Alejandro J Vila
Journal:  Chem Rev       Date:  2021-06-15       Impact factor: 72.087

5.  Discovery of novel new Delhi metallo-β-lactamases-1 inhibitors by multistep virtual screening.

Authors:  Xuequan Wang; Meiling Lu; Yang Shi; Yu Ou; Xiaodong Cheng
Journal:  PLoS One       Date:  2015-03-03       Impact factor: 3.240

6.  Differential effects of zinc binding on structured and disordered regions in the multidomain STIL protein.

Authors:  Hadar Amartely; Ahuvit David; Mai Shamir; Mario Lebendiker; Shai Izraeli; Assaf Friedler
Journal:  Chem Sci       Date:  2016-03-04       Impact factor: 9.825

7.  Membrane anchoring stabilizes and favors secretion of New Delhi metallo-β-lactamase.

Authors:  Lisandro J González; Guillermo Bahr; Toshiki G Nakashige; Elizabeth M Nolan; Robert A Bonomo; Alejandro J Vila
Journal:  Nat Chem Biol       Date:  2016-05-16       Impact factor: 15.040

  7 in total

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