Literature DB >> 19392807

Evaluating the potential impact of mismatches outside the antigen recognition site in unrelated hematopoietic stem cell transplantation: HLA-DRB1*1454 and DRB1*140101.

Y Xiao1, A M Lazaro, C Masaberg, M Haagenson, C Vierra-Green, S Spellman, S Dakshanamurthy, J Ng, C K Hurley.   

Abstract

DNA sequencing of 268 individuals drawn from four US populations carrying two unresolved DRB1*14 alleles differing only outside the antigen recognition site identified DRB1*1454 in the majority. A database of 4222 human leukocyte antigen (HLA)-matched hematopoietic stem cell transplantation donor-recipient pairs was queried to determine the number likely mismatched for DRB1*140101/DRB1*1454 but matched for class I loci. A power calculation suggests that more than 88,000 transplants among European Americans will be needed to identify sufficient 7/8 allele-matched pairs to evaluate the impact of the DRB1*140101/DRB1*1454 mismatch on transplant outcome. Molecular modeling of the HLA-DR interaction with the T-cell receptor and with CD4 suggests that the amino acid substitution distinguishing the two alleles will have minimal impact on allorecognition.

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Year:  2009        PMID： 19392807      PMCID： PMC3224974          DOI： 10.1111/j.1399-0039.2009.01245.x

Source DB:  PubMed          Journal:  Tissue Antigens        ISSN： 0001-2815


  9 in total

Review 1.  Comparative protein structure modeling of genes and genomes.

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2.  The Amber biomolecular simulation programs.

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Authors:  Carolyn Katovich Hurley; Marcelo Fernandez-Vina; William H Hildebrand; Harriet J Noreen; Elizabeth Trachtenberg; Thomas M Williams; Lee Ann Baxter-Lowe; Ann B Begovich; Effie Petersdorf; Annamalai Selvakumar; Peter Stastny; Janet Hegland; Robert J Hartzman; Michael Carston; Sharavi Gandham; Craig Kollman; Gene Nelson; Stephen Spellman; Michelle Setterholm
Journal:  Hum Immunol       Date:  2006-10-25       Impact factor: 2.850

4.  Crystal structure of the human CD4 N-terminal two-domain fragment complexed to a class II MHC molecule.

Authors:  J H Wang; R Meijers; Y Xiong; J H Liu; T Sakihama; R Zhang; A Joachimiak; E L Reinherz
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-04       Impact factor: 11.205

5.  Searching for HLA-DRB1*1206 in volunteer marrow donors in four US population groups.

Authors:  A M Lazaro; N K Steiner; K Cao; R Slack; D S Chen; Y Xiao; E Beduhn; J Ng; R J Hartzman; C K Hurley
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6.  The nature of diversity of HLA-DRB1 exon 3.

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Journal:  Tissue Antigens       Date:  2007-10

7.  The different level of expression of HLA-DRB1 and -DRB3 genes is controlled by conserved isotypic differences in promoter sequence.

Authors:  P Emery; B Mach; W Reith
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8.  High-resolution donor-recipient HLA matching contributes to the success of unrelated donor marrow transplantation.

Authors:  Stephanie J Lee; John Klein; Michael Haagenson; Lee Ann Baxter-Lowe; Dennis L Confer; Mary Eapen; Marcelo Fernandez-Vina; Neal Flomenberg; Mary Horowitz; Carolyn K Hurley; Harriet Noreen; Machteld Oudshoorn; Effie Petersdorf; Michelle Setterholm; Stephen Spellman; Daniel Weisdorf; Thomas M Williams; Claudio Anasetti
Journal:  Blood       Date:  2007-09-04       Impact factor: 22.113

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Journal:  J Exp Med       Date:  2002-03-04       Impact factor: 14.307
  9 in total
  9 in total

1.  Donor registries and search strategies.

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Journal:  Methods Mol Biol       Date:  2012

2.  A perspective on the selection of unrelated donors and cord blood units for transplantation.

Authors:  Stephen R Spellman; Mary Eapen; Brent R Logan; Carlheinz Mueller; Pablo Rubinstein; Michelle I Setterholm; Ann E Woolfrey; Mary M Horowitz; Dennis L Confer; Carolyn K Hurley
Journal:  Blood       Date:  2012-05-17       Impact factor: 22.113

3.  A one-step DNA sequencing strategy to HLA type hematopoietic stem cell donors at recruitment - rethinking typing strategies.

Authors:  B Tu; N Cha; R Yang; J Ng; C K Hurley
Journal:  Tissue Antigens       Date:  2013-03

4.  Limited HLA sequence variation outside of antigen recognition domain exons of 360 10 of 10 matched unrelated hematopoietic stem cell transplant donor-recipient pairs.

Authors:  L Hou; C Vierra-Green; A Lazaro; C Brady; M Haagenson; S Spellman; C K Hurley
Journal:  HLA       Date:  2016-12-15       Impact factor: 4.513

5.  Recommendations for donor human leukocyte antigen assessment and matching for allogeneic stem cell transplantation: consensus opinion of the Blood and Marrow Transplant Clinical Trials Network (BMT CTN).

Authors:  C Alan Howard; Marcelo A Fernandez-Vina; Frederick R Appelbaum; Dennis L Confer; Steven M Devine; Mary M Horowitz; Adam Mendizabal; Ginna G Laport; Marcelo C Pasquini; Stephen R Spellman
Journal:  Biol Blood Marrow Transplant       Date:  2014-09-30       Impact factor: 5.742

Review 6.  The Immunogenetics of Autoimmune Blistering Diseases.

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Journal:  Adv Exp Med Biol       Date:  2022       Impact factor: 2.622

7.  Strategies to work with HLA data in human populations for histocompatibility, clinical transplantation, epidemiology and population genetics: HLA-NET methodological recommendations.

Authors:  A Sanchez-Mazas; B Vidan-Jeras; J M Nunes; G Fischer; A-M Little; U Bekmane; S Buhler; S Buus; F H J Claas; A Dormoy; V Dubois; E Eglite; J F Eliaou; F Gonzalez-Galarza; Z Grubic; M Ivanova; B Lie; D Ligeiro; M L Lokki; B Martins da Silva; J Martorell; D Mendonça; D Middleton; D Papioannou Voniatis; C Papasteriades; F Poli; M E Riccio; M Spyropoulou Vlachou; G Sulcebe; S Tonks; M Toungouz Nevessignsky; C Vangenot; A-M van Walraven; J-M Tiercy
Journal:  Int J Immunogenet       Date:  2012-04-26       Impact factor: 1.466

8.  HLA-check: evaluating HLA data from SNP information.

Authors:  Marc Jeanmougin; Josselin Noirel; Cédric Coulonges; Jean-François Zagury
Journal:  BMC Bioinformatics       Date:  2017-07-11       Impact factor: 3.169

9.  Cost-efficient high-throughput HLA typing by MiSeq amplicon sequencing.

Authors:  Vinzenz Lange; Irina Böhme; Jan Hofmann; Kathrin Lang; Jürgen Sauter; Bianca Schöne; Patrick Paul; Viviane Albrecht; Johanna M Andreas; Daniel M Baier; Jochen Nething; Ulf Ehninger; Carmen Schwarzelt; Julia Pingel; Gerhard Ehninger; Alexander H Schmidt
Journal:  BMC Genomics       Date:  2014-01-24       Impact factor: 3.969
  9 in total

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