Literature DB >> 19392487

Funnel landscape and mutational robustness as a result of evolution under thermal noise.

Ayaka Sakata1, Koji Hukushima, Kunihiko Kaneko.   

Abstract

Using a statistical-mechanical model of spins, the evolution of phenotype dynamics is studied. Configurations of spins and their interaction J represent the phenotype and genotype, respectively. The fitness for selection of J is given by the equilibrium spin configurations determined by a Hamiltonian with J under thermal noise. The genotype J evolves through mutational changes under selection pressure to raise its fitness value. From Monte Carlo simulations we find that the frustration around the target spins disappears for J evolved under temperature beyond a certain threshold. The evolved Js give the funnel-like dynamics, which is robust to noise and also to mutation.

Mesh:

Year:  2009        PMID: 19392487     DOI: 10.1103/PhysRevLett.102.148101

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  5 in total

1.  Relationship among phenotypic plasticity, phenotypic fluctuations, robustness, and evolvability; Waddington's legacy revisited under the spirit of Einstein.

Authors:  Kunihiko Kaneko
Journal:  J Biosci       Date:  2009-10       Impact factor: 1.826

2.  Proportionality between variances in gene expression induced by noise and mutation: consequence of evolutionary robustness.

Authors:  Kunihiko Kaneko
Journal:  BMC Evol Biol       Date:  2011-01-26       Impact factor: 3.260

3.  Mutational robustness of gene regulatory networks.

Authors:  Aalt D J van Dijk; Simon van Mourik; Roeland C H J van Ham
Journal:  PLoS One       Date:  2012-01-25       Impact factor: 3.240

4.  Evolution of bow-tie architectures in biology.

Authors:  Tamar Friedlander; Avraham E Mayo; Tsvi Tlusty; Uri Alon
Journal:  PLoS Comput Biol       Date:  2015-03-23       Impact factor: 4.475

5.  Evolution of phenotypic fluctuation under host-parasite interactions.

Authors:  Naoto Nishiura; Kunihiko Kaneko
Journal:  PLoS Comput Biol       Date:  2021-11-09       Impact factor: 4.475

  5 in total

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