| Literature DB >> 19390641 |
So Yeon Kim1, Hyun Soo Ko, Young Suk Yu, Jeong-Min Hwang, Jong Joo Lee, Sung Yeun Kim, Ji Yeon Kim, Moon-Woo Seong, Kyu Hyung Park, Sung Sup Park.
Abstract
PURPOSE: X-linked retinoschisis (XLRS) is a recessively inherited disorder that causes macular degeneration and resultant visual defect in young males. Many genetic studies had focused on the patients in Western countries. We characterized the mutational spectrum of the RS1 gene in Korean patients with XLRS, and aimed to provide genetic information of XLRS in an Asian population.Entities:
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Year: 2009 PMID: 19390641 PMCID: PMC2672147
Source DB: PubMed Journal: Mol Vis ISSN: 1090-0535 Impact factor: 2.367
Figure 1Ocular findings in a Korean XLRS patient (case 16). A: Fundus photograph of the both eyes showed typical stellate pattern of schisis cavities in the macula. The inset presents an image of the macula magnified twofold. B: Fluorescein angiogram showed no definite leakage from the cystic cavities. C: Optical coherence tomography showed the schisis in the nerve fiber layer. D: Electroretinogram showed markedly decreased amplitude of b-wave and relative preservation of a-wave, which are key features of XLRS.
Primers for the RS1 mutation analysis.
| RS1 | PCR and sequencing | 1 | F: GGTTAACTTGATGGGGCTCA |
| R: CCCATCCTGTTTTCTGTTGG | |||
| 2 | F: TTCTTCCAGAAGGGGTGTTG | ||
| R: AAGCGATTCTCTTGCCTCAG | |||
| 3 | F: TCAATTTGGCCATTGTAGCA | ||
| R: GGAGAAAACCCGCATTAACA | |||
| 4 | F: TGAACCGTTGAAGACACAGC | ||
| R: AGTGCAGTGGTGTGATCTCG | |||
| 5 | F: TTTCTTGGGAGGTGGAGATG | ||
| R: GCAGATGATCCACTGTGCTG | |||
| 6 | F: GTTCCAGATGTCCCAAGCAT | ||
| R: TGCGAAATATAGCCCTGTCC | |||
| RS1 | Gene dosage | 1 | F: GGGAAGATGTCACGCAAGAT |
| R: AACTGGAAAGCCATCCACAC | |||
| 2 | F: GCCACATTGGGATTATCGTC | ||
| R: TGTTGGGATTACAGGCATGA | |||
| 3 | F: AACCACAGTTGCCTTTGACC | ||
| R: TGTTCCCAATGACTGTTCCA | |||
| 4 | F: CAGTCACCTGGTGCTTGTTG | ||
| R: CGAAGAATACCAGCCCACAT | |||
| 5 | F: TTTCTTGGGAGGTGGAGATG | ||
| R: TGTCCTGGAACTTGGAGAGC | |||
| 6 | F: GTTCCAGATGTCCCAAGCAT | ||
| R: GGTCCGAGTTGCCATAGAAG | |||
| HBB | Gene dosage | 2 | F: TTGGACCCAGAGGTTCTTTG |
| R: GAGCCAGGCCATCACTAAAG | |||
| B2M | Gene dosage | 2 | F: CTCACGTCATCCAGCAGAGA |
| R: AGTGGGGGTGAATTCAGTGT |
Forward and reverse primers sequences were used to amplify the RS1, HBB, and B2M genes. Forward primers for gene dosage analysis were labeled with 6-FAM. Annealing temperature was 55 °C, with exception of RS1 primers for amplification of exon 2 (60 °C), exon 4 (60 °C), and exon 5 (58 °C).
Primers for RT–PCR of the RS1 gene.
| Exon 1 and 2 | Exon 2–4 | 93F | GCCACATTGGGATTATCGTC | successful | successful |
| Exon 4 | 4aR | CGAAGAATACCAGCCCACAT | |||
| Exon 1 | Exon 1–6 | 36F | GGGAAGATGTCACGCAAGAT | successful | failed |
| Exon 6 | 6R | GGTCCGAGTTGCCATAGAAG | |||
| Exon 1 | Exon 1–6 | 48F | CGCAAGATAGAAGGCTTTTTG | successful | failed |
| Exon 6 | 6R | GGTCCGAGTTGCCATAGAAG | |||
Three primer pairs were designed to assess the effect of novel putative splicing mutation c.78+5G>A.
Clinical characteristics of patients enrolled in this study.
| 1 | p.R197H | 14 Y | Poor VA, R | (0.02/0.3)/(0.04/0.4) | B/B, inferior | NT | NT | not found |
| 2 | p.R197C | 4 Y | Poor VA, R | (0.02/0.2)/(0.02/0.2) | B/B, inferior | Reduced b wave | NT | R, VH |
| 3 | p.C142W | 5 Y | Poor VA | (0.15/0.15)/(0.15/0.15) | B/not found | NT | NT | not found |
| 4 | c.78+1G>T | 3 Y | Poor VA | (0.15/FC 50 cm)/(0.2/FC) | B/B, inferior | NT | NT | not found |
| 5 | p.L216P | 5 Y | Familial history of poor VA | (0.2/0.15)/(0.3/0.2) | B/B, inferior | NT | NT | not found |
| 6 | p.V76G | 8 M | Esodeviation since 5 M | (Mod/mod F&F)/(Mod/mod F&F) | B/B, inferior | Reduced b wave | NT | R, ISH |
| 7 | p.R102Q | 1 Y | Esodeviation | (Mod/mod F&F)/(0.3/0.04) | B/B, inferior | NT | NT | L, VH |
| 8 | c.78+5G>A | 3 Y | Poor VA since 11 M | (0.06/0.3)/(0.06/0.3) | B/B, inferior | NT | NT | B, VH |
| 9 | p.E72K | 6 Y | Poor VA | (0.02/0.1)/(0.2/0.4) | B/not found | Reduced b wave | NT | not found |
| 10 | p.R213Q | 3 Y | Esodeviation at 12 M | (0.1/HM)/(0.15/FC) | B/B, inferior | NT | NT | L, congenital cataract |
| 11 | p.R209C | 6 Y | Visual disturbance | (0.3/0.3)/(0.4/0.4) | B/R, inferior | NT | NT | not found |
| 12 | p.R182C | 3 M | Esodeviation | (Mod/mod F&F)/(0.08/0.04) | B/R, temporal & L, total | Reduced b wave | NT | B, VH&ISH |
| 13 | not found | 1 M | Abnormal fundus findings with history of premature birth | (Poor/poor F&F)/NT | B/B | Flat b wave | NT | B, VH&SRH |
| 14 | p.R182C | 6 Y | Poor VA, R | (0.2/0.3)/(0.2/0.3) | B/B, inferior | NT | NT | B, VH |
| 15 | p.E72Q | 6 Y | Poor VA | (0.3/0.3)/(0.3/0.3) | B/L | Reduced b wave | B, FS | not found |
| 16 | p.E72K | 6 Y | Poor VA | (0.15/0.15)/(0.3/0.2) | B/not found | Reduced b wave | B, FS | not found |
| 17 | p.R213W | 3 Y | Esodeviation | (0.2/0.2)/(0.3/0.2) | B/B | Reduced b wave | B, FS&PS | not found |
The clinical characteristics of Korean XLRS patients are summarized with their mutations. Abbreviations: diagnosis (Dx); visual acuity (VA); best corrected visual acuity (BCVA); foveal schisis (FS); peripheral schisis (PS); electroretinography (ERG); optical coherence tomography (OCT); years (Y); months (M); bilateral (B); right (R); left (L); finger counting (FC); fix and follow (F&F), hand movement (HM); moderate (mod); not tested (NT); vitreous hemorrhage (VH); intraschitic hemorrhage (ISH); subretinal hemorrhage (SRH).
Mutations and polymorphisms identified in the Korean XLRS patients
| c.78+1G>T | Intron 2 | Splicing mutation | Case 4 | Novel mutation |
| c.78+5G>A | Intron 2 | Splicing mutation | Case 8 | Novel mutation |
| c.184+35T>C | Intron 3 | Polymorphism | Case 12, 14 | |
| c.184+129T>G | Intron 3 | Polymorphism | Case 12, 14 | Novel variant |
| c.214G>A | Exon 4 | p.E72K | Case 9, 16 | [ |
| c.214G>C | Exon 4 | p.E72Q | Case 15 | [ |
| c.227T>G | Exon 4 | p.V76G | Case 6 | Novel missense mutation |
| c.305G>A | Exon 4 | p.R102Q | Case 7 | [ |
| c.426T>G | Exon 5 | p.C142W | Case 3 | [ |
| c.544C>T | Exon 6 | p.R182C | Case 12, 14 | [ |
| c.589C>T | Exon 6 | p.R197C | Case 2 | [ |
| c.590G>A | Exon 6 | p.R197H | Case 1 | [ |
| c.625C>T | Exon 6 | p.R209C | Case 11 | [ |
| c.637C>T | Exon 6 | p.R213W | Case 17 | [ |
| c.638G>A | Exon 6 | p.R213Q | Case 10 | [ |
| c.647T>C | Exon 6 | p.L216P | Case 5 | [ |
Figure 2Sequences of three novel mutations identified in this study. A: c.78+1G>T was found in case 4. B: c.227T>G (p.V76G) was found in case 6. C: c.78+5G>A was found in case 8. The upper and lower panels reveal the RS1 sequences of three probands and mothers, respectively. All three patients inherited the novel variants from their mothers. Positions of novel variants are indicated by arrows.
Figure 3The representative chromatograms of gene dosage PCR. A: A normal female has two copies of the RS1. B: A normal male has one copy of the RS1. C: The chromatogram of case 13 showed one copy of the RS1. Each amplified products from six exons of RS1 is indicated by the arrowhead above the fluorescent peak, and the size of each amplicon is shown below. The ratio calculated from the height of each peak is proportional to the targeted exon dosage, therefore duplication can be ruled out in the case 13. For example, the gene dosage of exon 4 was calculated as 1.0 in normal male, 2.09 in normal female, and 1.05 in case 13. Abbreviations: beta hemoglobin gene (HBB); beta-2-microglobulin gene (B2M).