Literature DB >> 19382779

Characterization of human skeletal muscle biopsy samples using shotgun proteomics.

Kenneth C Parker1, Ronan J Walsh, Mohammad Salajegheh, Anthony A Amato, Bryan Krastins, David A Sarracino, Steven A Greenberg.   

Abstract

We characterized the human muscle proteome by studying muscle biopsy specimens through four different workflows, using 1 or 2D peptide separation, SDS gels, or differential solubilization. By performing MS/MS analyses of 178 4-h LC separations derived from 31 patients, we identified more than 2000 proteins, and determined how 370 very abundant proteins behave upon differential solubilization. The resulting semiquantitative database should serve as a resource for muscle biochemistry.

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Year:  2009        PMID： 19382779     DOI： 10.1021/pr800873q

Source DB:  PubMed          Journal:  J Proteome Res        ISSN： 1535-3893            Impact factor:   4.466


  26 in total

Review 1.  A mini review: Proteomics approaches to understand disused vs. exercised human skeletal muscle.

Authors:  Yoshitake Cho; Robert S Ross
Journal:  Physiol Genomics       Date:  2018-06-29       Impact factor: 3.107

2.  Label-free profiling of skeletal muscle using high-definition mass spectrometry.

Authors:  Jatin G Burniston; Joanne Connolly; Heikki Kainulainen; Steven L Britton; Lauren G Koch
Journal:  Proteomics       Date:  2014-08-19       Impact factor: 3.984

3.  Proteomic profiling of the mouse diaphragm and refined mass spectrometric analysis of the dystrophic phenotype.

Authors:  Sandra Murphy; Margit Zweyer; Maren Raucamp; Michael Henry; Paula Meleady; Dieter Swandulla; Kay Ohlendieck
Journal:  J Muscle Res Cell Motil       Date:  2019-03-19       Impact factor: 2.698

Review 4.  Proteomic responses of skeletal and cardiac muscle to exercise.

Authors:  Jatin G Burniston; Eric P Hoffman
Journal:  Expert Rev Proteomics       Date:  2011-06       Impact factor: 3.940

5.  Interferon-stimulated gene 15 (ISG15) conjugates proteins in dermatomyositis muscle with perifascicular atrophy.

Authors:  Mohammad Salajegheh; Sek Won Kong; Jack L Pinkus; Ronan J Walsh; Anne Liao; Remedios Nazareno; Anthony A Amato; Bryan Krastins; Chris Morehouse; Brandon W Higgs; Bahija Jallal; Yihong Yao; David A Sarracino; Kenneth C Parker; Steven A Greenberg
Journal:  Ann Neurol       Date:  2010-01       Impact factor: 10.422

Review 6.  Role of non-immune mechanisms of muscle damage in idiopathic inflammatory myopathies.

Authors:  William Coley; Sree Rayavarapu; Kanneboyina Nagaraju
Journal:  Arthritis Res Ther       Date:  2012-04-27       Impact factor: 5.156

7.  Skeletal muscle proteomics: current approaches, technical challenges and emerging techniques.

Authors:  Kay Ohlendieck
Journal:  Skelet Muscle       Date:  2011-02-01       Impact factor: 4.912

8.  Top-down Mass Spectrometry of Sarcomeric Protein Post-translational Modifications from Non-human Primate Skeletal Muscle.

Authors:  Yutong Jin; Gary M Diffee; Ricki J Colman; Rozalyn M Anderson; Ying Ge
Journal:  J Am Soc Mass Spectrom       Date:  2019-03-04       Impact factor: 3.262

9.  Effects of an early experience of reward through maternal contact or its denial on laterality of protein expression in the developing rat hippocampus.

Authors:  Androniki Raftogianni; Antonios Stamatakis; Angeliki Papadopoulou; Konstantinos Vougas; Athanasios K Anagnostopoulos; Fotini Stylianopoulou; George Th Tsangaris
Journal:  PLoS One       Date:  2012-10-31       Impact factor: 3.240

10.  A network-based approach to identify protein kinases critical for regulating srebf1 in lipid deposition causing obesity.

Authors:  Shouxiang Sun; Xiaojuan Cao; L Filipe C Castro; Óscar Monroig; Jian Gao
Journal:  Funct Integr Genomics       Date:  2021-07-30       Impact factor: 3.674
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