Literature DB >> 19381917

Monitoring DNA breaks in optically highlighted chromatin in living cells by laser scanning confocal microscopy.

Michael J Kruhlak1, Arkady Celeste, André Nussenzweig.   

Abstract

The recognition and repair of DNA lesions occurs within a chromatin environment. Genetically tagging fluorescent proteins to DNA damage response proteins has provided spatial and temporal details concerning the establishment of biochemical subnuclear regions geared toward metabolizing genomic lesions. A specific marker for chromatin regions containing DNA breaks is required to study the initial dynamic structural changes in chromatin when DNA breaks occur. Here we present the experimental protocols used to investigate the dynamics of chromatin structure immediately after the simultaneous photoactivation of PAGFP-tagged core histone H2B and introduction of DNA breaks using UVA laser microirradiation on a laser scanning confocal microscope.

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Year:  2009        PMID: 19381917      PMCID: PMC6993211          DOI: 10.1007/978-1-59745-190-1_9

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  25 in total

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Authors:  J White; E Stelzer
Journal:  Trends Cell Biol       Date:  1999-02       Impact factor: 20.808

2.  A photoactivatable GFP for selective photolabeling of proteins and cells.

Authors:  George H Patterson; Jennifer Lippincott-Schwartz
Journal:  Science       Date:  2002-09-13       Impact factor: 47.728

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Authors:  George H Patterson; Jennifer Lippincott-Schwartz
Journal:  Methods       Date:  2004-04       Impact factor: 3.608

Review 4.  Chromatin dynamics and the preservation of genetic information.

Authors:  Jessica A Downs; Michel C Nussenzweig; André Nussenzweig
Journal:  Nature       Date:  2007-06-21       Impact factor: 49.962

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Authors:  K Takahashi; I Kaneko
Journal:  Int J Radiat Biol Relat Stud Phys Chem Med       Date:  1985-09

6.  Detection of laser--UV microirradiation-induced DNA photolesions by immunofluorescent staining.

Authors:  C Cremer; T Cremer; M Fukuda; K Nakanishi
Journal:  Hum Genet       Date:  1980       Impact factor: 4.132

7.  Chromosomal aberrations in synchronized mammalian cells treated with 5-bromo-deoxyuridine and irradiated by ultra-violet light.

Authors:  B Djordjevic; O Djordjevic
Journal:  Nature       Date:  1965-06-12       Impact factor: 49.962

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Journal:  Radiat Res       Date:  1993-05       Impact factor: 2.841

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Authors:  J D Regan; R B Setlow; R D Ley
Journal:  Proc Natl Acad Sci U S A       Date:  1971-04       Impact factor: 11.205

10.  Effects of Hoechst 33342 on survival and growth of two tumor cell lines and on hematopoietically normal bone marrow cells.

Authors:  J Fried; J Doblin; S Takamoto; A Perez; H Hansen; B Clarkson
Journal:  Cytometry       Date:  1982-07
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  7 in total

1.  Nuclear phosphoinositide 3-kinase beta controls double-strand break DNA repair.

Authors:  Amit Kumar; Oscar Fernandez-Capetillo; Oscar Fernadez-Capetillo; Ana C Carrera
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-05       Impact factor: 11.205

2.  Femtosecond near-infrared laser microirradiation reveals a crucial role for PARP signaling on factor assemblies at DNA damage sites.

Authors:  Gladys Mae Saquilabon Cruz; Xiangduo Kong; Bárbara Alcaraz Silva; Nima Khatibzadeh; Ryan Thai; Michael W Berns; Kyoko Yokomori
Journal:  Nucleic Acids Res       Date:  2015-09-30       Impact factor: 16.971

3.  Laser Microirradiation to Study In Vivo Cellular Responses to Simple and Complex DNA Damage.

Authors:  Xiangduo Kong; Gladys M S Cruz; Bárbara A Silva; Nicole M Wakida; Nima Khatibzadeh; Michael W Berns; Kyoko Yokomori
Journal:  J Vis Exp       Date:  2018-01-31       Impact factor: 1.355

Review 4.  Opportunities and challenges of radiotherapy for treating cancer.

Authors:  Dörthe Schaue; William H McBride
Journal:  Nat Rev Clin Oncol       Date:  2015-06-30       Impact factor: 66.675

5.  SIRT1 collaborates with ATM and HDAC1 to maintain genomic stability in neurons.

Authors:  Matthew M Dobbin; Ram Madabhushi; Ling Pan; Yue Chen; Dohoon Kim; Jun Gao; Biafra Ahanonu; Ping-Chieh Pao; Yi Qiu; Yingming Zhao; Li-Huei Tsai
Journal:  Nat Neurosci       Date:  2013-07-14       Impact factor: 24.884

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Authors:  Wen-Yuan Wang; Ling Pan; Susan C Su; Emma J Quinn; Megumi Sasaki; Jessica C Jimenez; Ian R A Mackenzie; Eric J Huang; Li-Huei Tsai
Journal:  Nat Neurosci       Date:  2013-09-15       Impact factor: 24.884

7.  MU2 and HP1a regulate the recognition of double strand breaks in Drosophila melanogaster.

Authors:  Raghuvar Dronamraju; James M Mason
Journal:  PLoS One       Date:  2011-09-23       Impact factor: 3.240

  7 in total

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