Literature DB >> 19374016

Induced membrane domains as visualized by electron tomography and template matching.

Misjaël N Lebbink1, Elly van Donselaar, Bruno M Humbel, Louis O Hertzberger, Jan Andries Post, Arie J Verkleij.   

Abstract

Membranes play a crucial role in many cellular processes, and it is therefore not surprising that many electron tomographic studies in life sciences concern membranous structures. While these tomographic studies provide many new insights into membrane connections and continuities in three dimensions, they are mostly limited to a macro-morphological level. In this paper, we demonstrate that by combining electron tomography and three-dimensional template matching we are able to investigate membrane morphology at a new level: membrane domains in three dimensions. To test this, temperature induced lipid phase separation in the biological model system of the Escherichia coli bacteria was used. We compared the inner (containing phospholipids) and outer (containing lipopolysaccharides) leaflet of the E. coli outer membrane at both 37 and -20 degrees C, and could visualize how these leaflets react differently to temperature shifts. These findings can be explained by the physico-chemical nature of the building blocks and are in line with earlier published data. This study shows that the combination of electron tomography and template matching is robust enough to visualize membrane domains that are beyond the perception of manual annotation.

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Year:  2009        PMID: 19374016     DOI: 10.1016/j.jsb.2009.01.006

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  3 in total

Review 1.  Putting structure into context: fitting of atomic models into electron microscopic and electron tomographic reconstructions.

Authors:  Niels Volkmann
Journal:  Curr Opin Cell Biol       Date:  2011-12-05       Impact factor: 8.382

2.  Few-shot learning for classification of novel macromolecular structures in cryo-electron tomograms.

Authors:  Ran Li; Liangyong Yu; Bo Zhou; Xiangrui Zeng; Zhenyu Wang; Xiaoyan Yang; Jing Zhang; Xin Gao; Rui Jiang; Min Xu
Journal:  PLoS Comput Biol       Date:  2020-11-11       Impact factor: 4.475

3.  Imaging transient blood vessel fusion events in zebrafish by correlative volume electron microscopy.

Authors:  Hannah E J Armer; Giovanni Mariggi; Ken M Y Png; Christel Genoud; Alexander G Monteith; Andrew J Bushby; Holger Gerhardt; Lucy M Collinson
Journal:  PLoS One       Date:  2009-11-06       Impact factor: 3.240

  3 in total

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