Literature DB >> 19369197

Structural and dynamic aspects related to oligomerization of apo SOD1 and its mutants.

Lucia Banci1, Ivano Bertini, Mirela Boca, Vito Calderone, Francesca Cantini, Stefania Girotto, Miguela Vieru.   

Abstract

The structural and dynamical properties of the metal-free form of WT human superoxide dismutase 1 (SOD1) and its familial amyotrophic lateral sclerosis (fALS)-related mutants, T54R and I113T, were characterized both in solution, through NMR, and in the crystal, through X-ray diffraction. We found that all 3 X-ray structures show significant structural disorder in 2 loop regions that are, at variance, well defined in the fully-metalated structures. Interestingly, the apo state crystallizes only at low temperatures, whereas all 3 proteins in the metalated form crystallize at any temperature, suggesting that crystallization selects one of the most stable conformations among the manifold adopted by the apo form in solution. Indeed, NMR experiments show that the protein in solution is highly disordered, sampling a large range of conformations. The large conformational variability of the apo state allows the free reduced cysteine Cys-6 to become highly solvent accessible in solution, whereas it is essentially buried in the metalated state and the crystal structures. Such solvent accessibility, together with that of Cys-111, accounts for the tendency to oligomerization of the metal-free state. The present results suggest that the investigation of the solution state coupled with that of the crystal state can provide major insights into SOD1 pathway toward oligomerization in relation to fALS.

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Year:  2009        PMID: 19369197      PMCID: PMC2678485          DOI: 10.1073/pnas.0809845106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  32 in total

1.  Factors controlling the uptake of yeast copper/zinc superoxide dismutase into mitochondria.

Authors:  Lori Sturtz Field; Yoshiaki Furukawa; Thomas V O'Halloran; Valeria Cizewski Culotta
Journal:  J Biol Chem       Date:  2003-05-14       Impact factor: 5.157

2.  Subcellular distribution of superoxide dismutases (SOD) in rat liver: Cu,Zn-SOD in mitochondria.

Authors:  A Okado-Matsumoto; I Fridovich
Journal:  J Biol Chem       Date:  2001-08-15       Impact factor: 5.157

3.  A fraction of yeast Cu,Zn-superoxide dismutase and its metallochaperone, CCS, localize to the intermembrane space of mitochondria. A physiological role for SOD1 in guarding against mitochondrial oxidative damage.

Authors:  L A Sturtz; K Diekert; L T Jensen; R Lill; V C Culotta
Journal:  J Biol Chem       Date:  2001-08-10       Impact factor: 5.157

4.  Familial amyotrophic lateral sclerosis-associated mutations decrease the thermal stability of distinctly metallated species of human copper/zinc superoxide dismutase.

Authors:  Jorge A Rodriguez; Joan S Valentine; Daryl K Eggers; James A Roe; Ashutosh Tiwari; Robert H Brown; Lawrence J Hayward
Journal:  J Biol Chem       Date:  2002-02-19       Impact factor: 5.157

5.  The structure of holo and metal-deficient wild-type human Cu, Zn superoxide dismutase and its relevance to familial amyotrophic lateral sclerosis.

Authors:  Richard W Strange; Svetlana Antonyuk; Michael A Hough; Peter A Doucette; Jorge A Rodriguez; P John Hart; Lawrence J Hayward; Joan S Valentine; S Samar Hasnain
Journal:  J Mol Biol       Date:  2003-05-09       Impact factor: 5.469

6.  Insights into Lou Gehrig's disease from the structure and instability of the A4V mutant of human Cu,Zn superoxide dismutase.

Authors:  Rosa M F Cardoso; Maria M Thayer; Michael DiDonato; Terence P Lo; Cami K Bruns; Elizabeth D Getzoff; John A Tainer
Journal:  J Mol Biol       Date:  2002-11-22       Impact factor: 5.469

7.  Amyloid-like filaments and water-filled nanotubes formed by SOD1 mutant proteins linked to familial ALS.

Authors:  Jennifer Stine Elam; Alexander B Taylor; Richard Strange; Svetlana Antonyuk; Peter A Doucette; Jorge A Rodriguez; S Samar Hasnain; Lawrence J Hayward; Joan Selverstone Valentine; Todd O Yeates; P John Hart
Journal:  Nat Struct Biol       Date:  2003-06

8.  A limited role for disulfide cross-linking in the aggregation of mutant SOD1 linked to familial amyotrophic lateral sclerosis.

Authors:  Celeste M Karch; David R Borchelt
Journal:  J Biol Chem       Date:  2008-03-03       Impact factor: 5.157

9.  Arrangement of subunits and ordering of beta-strands in an amyloid sheet.

Authors:  Ahmed A Serag; Christian Altenbach; Mari Gingery; Wayne L Hubbell; Todd O Yeates
Journal:  Nat Struct Biol       Date:  2002-10

10.  SOD1 and amyotrophic lateral sclerosis: mutations and oligomerization.

Authors:  Lucia Banci; Ivano Bertini; Mirela Boca; Stefania Girotto; Manuele Martinelli; Joan Selverstone Valentine; Miguela Vieru
Journal:  PLoS One       Date:  2008-02-27       Impact factor: 3.240

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  45 in total

1.  Destabilization of the dimer interface is a common consequence of diverse ALS-associated mutations in metal free SOD1.

Authors:  Helen R Broom; Jessica A O Rumfeldt; Kenrick A Vassall; Elizabeth M Meiering
Journal:  Protein Sci       Date:  2015-10-05       Impact factor: 6.725

2.  SOD1 mutations targeting surface hydrogen bonds promote amyotrophic lateral sclerosis without reducing apo-state stability.

Authors:  Roberth Byström; Peter M Andersen; Gerhard Gröbner; Mikael Oliveberg
Journal:  J Biol Chem       Date:  2010-02-26       Impact factor: 5.157

3.  Global structural motions from the strain of a single hydrogen bond.

Authors:  Jens Danielsson; Wael Awad; Kadhirvel Saraboji; Martin Kurnik; Lisa Lang; Lina Leinartaite; Stefan L Marklund; Derek T Logan; Mikael Oliveberg
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-19       Impact factor: 11.205

4.  A misfolded dimer of Cu/Zn-superoxide dismutase leading to pathological oligomerization in amyotrophic lateral sclerosis.

Authors:  Itsuki Anzai; Eiichi Tokuda; Atsushi Mukaiyama; Shuji Akiyama; Fumito Endo; Koji Yamanaka; Hidemi Misawa; Yoshiaki Furukawa
Journal:  Protein Sci       Date:  2017-02-12       Impact factor: 6.725

5.  Addition of exogenous SOD1 aggregates causes TDP-43 mislocalisation and aggregation.

Authors:  Rafaa Zeineddine; Natalie E Farrawell; Isabella A Lambert-Smith; Justin J Yerbury
Journal:  Cell Stress Chaperones       Date:  2017-05-30       Impact factor: 3.667

Review 6.  Role of mitochondria in mutant SOD1 linked amyotrophic lateral sclerosis.

Authors:  Wenzhi Tan; Piera Pasinelli; Davide Trotti
Journal:  Biochim Biophys Acta       Date:  2014-02-22

Review 7.  Superoxide dismutases and superoxide reductases.

Authors:  Yuewei Sheng; Isabel A Abreu; Diane E Cabelli; Michael J Maroney; Anne-Frances Miller; Miguel Teixeira; Joan Selverstone Valentine
Journal:  Chem Rev       Date:  2014-04-01       Impact factor: 60.622

8.  Solid-state NMR studies of metal-free SOD1 fibrillar structures.

Authors:  Lucia Banci; Olga Blaževitš; Francesca Cantini; Jens Danielsson; Lisa Lang; Claudio Luchinat; Jiafei Mao; Mikael Oliveberg; Enrico Ravera
Journal:  J Biol Inorg Chem       Date:  2014-04-10       Impact factor: 3.358

9.  Aggregation propensities of superoxide dismutase G93 hotspot mutants mirror ALS clinical phenotypes.

Authors:  Ashley J Pratt; David S Shin; Gregory E Merz; Robert P Rambo; W Andrew Lancaster; Kevin N Dyer; Peter P Borbat; Farris L Poole; Michael W W Adams; Jack H Freed; Brian R Crane; John A Tainer; Elizabeth D Getzoff
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-14       Impact factor: 11.205

10.  DNA-triggered aggregation of copper, zinc superoxide dismutase in the presence of ascorbate.

Authors:  Jun Yin; Si Hu; Wei Jiang; Liang Liu; Shemin Lan; Xuegang Song; Changlin Liu
Journal:  PLoS One       Date:  2010-08-20       Impact factor: 3.240

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