Literature DB >> 19366629

Multiple target regulation by small noncoding RNAs rewires gene expression at the post-transcriptional level.

Kai Papenfort1, Jörg Vogel.   

Abstract

Small noncoding RNAs (sRNAs), often in conjunction with Hfq protein, have increasingly been shown to regulate multiple rather than individual mRNAs, thereby reprogramming gene expression at the post-transcriptional level. This review summarizes how and when several such regulators (CyaR, DsrA, GcvB, OmrAB, RNAIII, RybB, RyhB) act upon multiple targets.

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Year:  2009        PMID： 19366629     DOI： 10.1016/j.resmic.2009.03.004

Source DB:  PubMed          Journal:  Res Microbiol        ISSN： 0923-2508            Impact factor:   3.992


  67 in total

1.  Thermodynamic and kinetic analysis of an RNA kissing interaction and its resolution into an extended duplex.

Authors:  Nilshad Salim; Rajan Lamichhane; Rui Zhao; Tuhina Banerjee; Jane Philip; David Rueda; Andrew L Feig
Journal:  Biophys J       Date:  2012-03-06       Impact factor: 4.033

2.  Small RNA binding to the lateral surface of Hfq hexamers and structural rearrangements upon mRNA target recognition.

Authors:  Evelyn Sauer; Steffen Schmidt; Oliver Weichenrieder
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-29       Impact factor: 11.205

3.  Proteome-wide alterations in Escherichia coli translation rates upon anaerobiosis.

Authors:  Gertjan Kramer; Richard R Sprenger; Merel A Nessen; Winfried Roseboom; Dave Speijer; Luitzen de Jong; M Joost Teixeira de Mattos; JaapWillem Back; Chris G de Koster
Journal:  Mol Cell Proteomics       Date:  2010-08-16       Impact factor: 5.911

4.  Evidence for an autonomous 5' target recognition domain in an Hfq-associated small RNA.

Authors:  Kai Papenfort; Marie Bouvier; Franziska Mika; Cynthia M Sharma; Jörg Vogel
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-08       Impact factor: 11.205

Review 5.  Origin, Evolution, and Loss of Bacterial Small RNAs.

Authors:  H Auguste Dutcher; Rahul Raghavan
Journal:  Microbiol Spectr       Date:  2018-04

6.  Reprogramming of gene expression in Escherichia coli cultured on pyruvate versus glucose.

Authors:  Anna Chao Kaberdina; Olatz Ruiz-Larrabeiti; Sue Lin-Chao; Vladimir R Kaberdin
Journal:  Mol Genet Genomics       Date:  2019-07-30       Impact factor: 3.291

7.  Requirement of the CsdA DEAD-box helicase for low temperature riboregulation of rpoS mRNA.

Authors:  Armin Resch; Branislav Većerek; Kristina Palavra; Udo Bläsi
Journal:  RNA Biol       Date:  2010-11-01       Impact factor: 4.652

8.  In silico 'fishing' using known small regulatory RNA (sRNA) candidates as the decoy from Escherichia coli, Salmonella typhi and Salmonella typhimurium manifested 14 novel sRNA candidates in the orthologous region of Proteus mirabilis.

Authors:  Selvaraju KishanRaj; Samuggam Sumitha; Balakrishnan Siventhiran; Othayakumar Thiviyaa; Kathiresan V Sathasivam; Rathinam Xavier; Thean-Hock Tang; Marimuthu Citartan; Suresh V Chinni
Journal:  Mol Biol Rep       Date:  2018-10-03       Impact factor: 2.316

9.  Myofibril-inducing RNA (MIR) is essential for tropomyosin expression and myofibrillogenesis in axolotl hearts.

Authors:  Chi Zhang; Pingping Jia; Xupei Huang; Gian Franco Sferrazza; Gagani Athauda; Mohan P Achary; Jikui Wang; Sharon L Lemanski; Dipak K Dube; Larry F Lemanski
Journal:  J Biomed Sci       Date:  2009-09-03       Impact factor: 8.410

10.  Defining a role for Hfq in Gram-positive bacteria: evidence for Hfq-dependent antisense regulation in Listeria monocytogenes.

Authors:  Jesper Sejrup Nielsen; Lisbeth Kristensen Lei; Tine Ebersbach; Anders Steno Olsen; Janne Kudsk Klitgaard; Poul Valentin-Hansen; Birgitte Haahr Kallipolitis
Journal:  Nucleic Acids Res       Date:  2009-11-26       Impact factor: 16.971
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