Literature DB >> 19363126

Genetic architecture of tameness in a rat model of animal domestication.

Frank W Albert1, Orjan Carlborg, Irina Plyusnina, Francois Besnier, Daniela Hedwig, Susann Lautenschläger, Doreen Lorenz, Jenny McIntosh, Christof Neumann, Henning Richter, Claudia Zeising, Rimma Kozhemyakina, Olesya Shchepina, Jürgen Kratzsch, Lyudmila Trut, Daniel Teupser, Joachim Thiery, Torsten Schöneberg, Leif Andersson, Svante Pääbo.   

Abstract

A common feature of domestic animals is tameness-i.e., they tolerate and are unafraid of human presence and handling. To gain insight into the genetic basis of tameness and aggression, we studied an intercross between two lines of rats (Rattus norvegicus) selected over >60 generations for increased tameness and increased aggression against humans, respectively. We measured 45 traits, including tameness and aggression, anxiety-related traits, organ weights, and levels of serum components in >700 rats from an intercross population. Using 201 genetic markers, we identified two significant quantitative trait loci (QTL) for tameness. These loci overlap with QTL for adrenal gland weight and for anxiety-related traits and are part of a five-locus epistatic network influencing tameness. An additional QTL influences the occurrence of white coat spots, but shows no significant effect on tameness. The loci described here are important starting points for finding the genes that cause tameness in these rats and potentially in domestic animals in general.

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Year:  2009        PMID: 19363126      PMCID: PMC2691762          DOI: 10.1534/genetics.109.102186

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  52 in total

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2.  Epistasis and the release of genetic variation during long-term selection.

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4.  Reduction in 5-HT1A receptor density, 5-HT1A mRNA expression, and functional correlates for 5-HT1A receptors in genetically defined aggressive rats.

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Journal:  J Neurosci Res       Date:  2005-04-15       Impact factor: 4.164

5.  Molecular basis for the dominant white phenotype in the domestic pig.

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Journal:  Genome Res       Date:  1998-08       Impact factor: 9.043

6.  A simple and rapid method for calculating identity-by-descent matrices using multiple markers.

Authors:  R Pong-Wong; A W George; J A Woolliams; C S Haley
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7.  Identification of quantitative trait Loci for anxiety and locomotion phenotypes in rat recombinant inbred strains.

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Journal:  Behav Genet       Date:  2004-01       Impact factor: 2.805

8.  Estimation of genetic effects and genotype-phenotype maps.

Authors:  Arnaud Le Rouzic; José M Alvarez-Castro
Journal:  Evol Bioinform Online       Date:  2008-06-28       Impact factor: 1.625

9.  A general and efficient method for estimating continuous IBD functions for use in genome scans for QTL.

Authors:  Francois Besnier; Orjan Carlborg
Journal:  BMC Bioinformatics       Date:  2007-11-13       Impact factor: 3.169

10.  cis-Regulatory changes in Kit ligand expression and parallel evolution of pigmentation in sticklebacks and humans.

Authors:  Craig T Miller; Sandra Beleza; Alex A Pollen; Dolph Schluter; Rick A Kittles; Mark D Shriver; David M Kingsley
Journal:  Cell       Date:  2007-12-14       Impact factor: 41.582

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  47 in total

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Review 2.  Divergence hitchhiking and the spread of genomic isolation during ecological speciation-with-gene-flow.

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Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-02-05       Impact factor: 6.237

Review 3.  The genetic and evolutionary basis of colour variation in vertebrates.

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Journal:  Cell Mol Life Sci       Date:  2010-03-14       Impact factor: 9.261

Review 4.  Deciphering the genetic basis of animal domestication.

Authors:  Pamela Wiener; Samantha Wilkinson
Journal:  Proc Biol Sci       Date:  2011-09-01       Impact factor: 5.349

5.  Current perspectives and the future of domestication studies.

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Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-22       Impact factor: 11.205

Review 6.  The biological control of voluntary exercise, spontaneous physical activity and daily energy expenditure in relation to obesity: human and rodent perspectives.

Authors:  Theodore Garland; Heidi Schutz; Mark A Chappell; Brooke K Keeney; Thomas H Meek; Lynn E Copes; Wendy Acosta; Clemens Drenowatz; Robert C Maciel; Gertjan van Dijk; Catherine M Kotz; Joey C Eisenmann
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7.  Mapping Loci for fox domestication: deconstruction/reconstruction of a behavioral phenotype.

Authors:  Anna V Kukekova; Lyudmila N Trut; Kevin Chase; Anastasiya V Kharlamova; Jennifer L Johnson; Svetlana V Temnykh; Irina N Oskina; Rimma G Gulevich; Anastasiya V Vladimirova; Simon Klebanov; Darya V Shepeleva; Svetlana G Shikhevich; Gregory M Acland; Karl G Lark
Journal:  Behav Genet       Date:  2010-12-14       Impact factor: 2.805

8.  Targeted resequencing of a genomic region influencing tameness and aggression reveals multiple signals of positive selection.

Authors:  F W Albert; E Hodges; J D Jensen; F Besnier; Z Xuan; M Rooks; A Bhattacharjee; L Brizuela; J M Good; R E Green; H A Burbano; I Z Plyusnina; L Trut; L Andersson; T Schöneberg; O Carlborg; G J Hannon; S Pääbo
Journal:  Heredity (Edinb)       Date:  2011-02-09       Impact factor: 3.821

9.  Measuring Active and Passive Tameness Separately in Mice.

Authors:  Hiromichi Nagayama; Yuki Matsumoto; Akira Tanave; Motoko Nihei; Tatsuhiko Goto; Tsuyoshi Koide
Journal:  J Vis Exp       Date:  2018-08-10       Impact factor: 1.355

10.  Selectively bred rat model system for low and high response to exercise training.

Authors:  Lauren Gerard Koch; Geoffrey E Pollott; Steven L Britton
Journal:  Physiol Genomics       Date:  2013-05-28       Impact factor: 3.107

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