Literature DB >> 19362651

Enzymology of aminoglycoside biosynthesis-deduction from gene clusters.

Udo F Wehmeier1, Wolfgang Piepersberg.   

Abstract

The classical aminoglycosides are, with very few exceptions, typically actinobacterial secondary metabolites with antimicrobial activities all mediated by inhibiting translation on the 30S subunit of the bacterial ribosome. Some chemically related natural products inhibit glucosidases by mimicking oligo-alpha-1,4-glucosides. The biochemistry of the aminoglycoside biosynthetic pathways is still a developing field since none of the pathways has been analyzed to completeness as yet. In this chapter we treat the enzymology of aminoglycoside biosyntheses as far as it becomes apparent from recent investigations based on the availability of DNA sequence data of biosynthetic gene clusters for all major structural classes of these bacterial metabolites. We give a more general overview of the field, including descriptions of some key enzymes in various aminoglycoside pathways, whereas in Chapter 20 provides a detailed account of the better-studied enzymology thus far known for the neomycin and butirosin pathways.

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Year:  2009        PMID: 19362651     DOI: 10.1016/S0076-6879(09)04619-9

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  14 in total

1.  Self-Resistance during Muraymycin Biosynthesis: a Complementary Nucleotidyltransferase and Phosphotransferase with Identical Modification Sites and Distinct Temporal Order.

Authors:  Zheng Cui; Xia-Chang Wang; Xiaodong Liu; Anke Lemke; Stefan Koppermann; Christian Ducho; Jürgen Rohr; Jon S Thorson; Steven G Van Lanen
Journal:  Antimicrob Agents Chemother       Date:  2018-06-26       Impact factor: 5.191

2.  Detection and Quantification of Ribosome Inhibition by Aminoglycoside Antibiotics in Living Bacteria Using an Orthogonal Ribosome-Controlled Fluorescent Reporter.

Authors:  Shijie Huang; Xuechen Zhu; Charles E Melançon
Journal:  ACS Chem Biol       Date:  2015-11-04       Impact factor: 5.100

3.  Discovery of parallel pathways of kanamycin biosynthesis allows antibiotic manipulation.

Authors:  Je Won Park; Sung Ryeol Park; Keshav Kumar Nepal; Ah Reum Han; Yeon Hee Ban; Young Ji Yoo; Eun Ji Kim; Eui Min Kim; Dooil Kim; Jae Kyung Sohng; Yeo Joon Yoon
Journal:  Nat Chem Biol       Date:  2011-10-09       Impact factor: 15.040

4.  Amidoligases with ATP-grasp, glutamine synthetase-like and acetyltransferase-like domains: synthesis of novel metabolites and peptide modifications of proteins.

Authors:  Lakshminarayan M Iyer; Saraswathi Abhiman; A Maxwell Burroughs; L Aravind
Journal:  Mol Biosyst       Date:  2009-10-13

5.  X-ray analysis of butirosin biosynthetic enzyme BtrN redefines structural motifs for AdoMet radical chemistry.

Authors:  Peter J Goldman; Tyler L Grove; Squire J Booker; Catherine L Drennan
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-18       Impact factor: 11.205

6.  Structure of Saccharomyces cerevisiae mitochondrial Qri7 in complex with AMP.

Authors:  Takumi Tominaga; Kan Kobayashi; Ryohei Ishii; Ryuichiro Ishitani; Osamu Nureki
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-07-23       Impact factor: 1.056

7.  The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110.

Authors:  Patrick Schwientek; Rafael Szczepanowski; Christian Rückert; Jörn Kalinowski; Andreas Klein; Klaus Selber; Udo F Wehmeier; Jens Stoye; Alfred Pühler
Journal:  BMC Genomics       Date:  2012-03-23       Impact factor: 3.969

8.  The MalR type regulator AcrC is a transcriptional repressor of acarbose biosynthetic genes in Actinoplanes sp. SE50/110.

Authors:  Timo Wolf; Julian Droste; Tetiana Gren; Vera Ortseifen; Susanne Schneiker-Bekel; Till Zemke; Alfred Pühler; Jörn Kalinowski
Journal:  BMC Genomics       Date:  2017-07-25       Impact factor: 3.969

Review 9.  Parallel pathways in the biosynthesis of aminoglycoside antibiotics.

Authors:  Yi Yu; Qi Zhang; Zixin Deng
Journal:  F1000Res       Date:  2017-05-18

Review 10.  Sources and Fates of Carbamyl Phosphate: A Labile Energy-Rich Molecule with Multiple Facets.

Authors:  Dashuang Shi; Ljubica Caldovic; Mendel Tuchman
Journal:  Biology (Basel)       Date:  2018-06-12
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