Literature DB >> 19358229

Glycoproteomics in neurodegenerative diseases.

Hyejin Hwang1, Jianpeng Zhang, Kathryn A Chung, James B Leverenz, Cyrus P Zabetian, Elaine R Peskind, Joseph Jankovic, Zhen Su, Aneeka M Hancock, Catherine Pan, Thomas J Montine, Sheng Pan, John Nutt, Roger Albin, Marla Gearing, Richard P Beyer, Min Shi, Jing Zhang.   

Abstract

Protein glycosylation regulates protein function and cellular distribution. Additionally, aberrant protein glycosylations have been recognized to play major roles in human disorders, including neurodegenerative diseases. Glycoproteomics, a branch of proteomics that catalogs and quantifies glycoproteins, provides a powerful means to systematically profile the glycopeptides or glycoproteins of a complex mixture that are highly enriched in body fluids, and therefore, carry great potential to be diagnostic and/or prognostic markers. Application of this mass spectrometry-based technology to the study of neurodegenerative disorders (e.g., Alzheimer's disease and Parkinson's disease) is relatively new, and is expected to provide insight into the biochemical pathogenesis of neurodegeneration, as well as biomarker discovery. In this review, we have summarized the current understanding of glycoproteins in biology and neurodegenerative disease, and have discussed existing proteomic technologies that are utilized to characterize glycoproteins. Some of the ongoing studies, where glycoproteins isolated from cerebrospinal fluid and human brain are being characterized in Parkinson's disease at different stages versus controls, are presented, along with future applications of targeted validation of brain specific glycoproteins in body fluids. Copyright 2009 Wiley Periodicals, Inc.

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Year:  2010        PMID: 19358229      PMCID: PMC2799547          DOI: 10.1002/mas.20221

Source DB:  PubMed          Journal:  Mass Spectrom Rev        ISSN: 0277-7037            Impact factor:   10.946


  167 in total

1.  Glycoprotein identification and localization of O-glycosylation sites by mass spectrometric analysis of deglycosylated/alkylaminylated peptide fragments.

Authors:  F G Hanisch; M Jovanovic; J Peter-Katalinic
Journal:  Anal Biochem       Date:  2001-03-01       Impact factor: 3.365

2.  Lectin affinity capture, isotope-coded tagging and mass spectrometry to identify N-linked glycoproteins.

Authors:  Hiroyuki Kaji; Haruna Saito; Yoshio Yamauchi; Takashi Shinkawa; Masato Taoka; Jun Hirabayashi; Ken-ichi Kasai; Nobuhiro Takahashi; Toshiaki Isobe
Journal:  Nat Biotechnol       Date:  2003-05-18       Impact factor: 54.908

Review 3.  Cell surface biology mediated by low affinity multivalent protein-glycan interactions.

Authors:  Brian E Collins; James C Paulson
Journal:  Curr Opin Chem Biol       Date:  2004-12       Impact factor: 8.822

4.  Perspective: a program to improve protein biomarker discovery for cancer.

Authors:  Ruedi Aebersold; Leigh Anderson; Richard Caprioli; Brian Druker; Leland Hartwell; Richard Smith
Journal:  J Proteome Res       Date:  2005 Jul-Aug       Impact factor: 4.466

Review 5.  Shotgun proteomics using the iTRAQ isobaric tags.

Authors:  Kunal Aggarwal; Leila H Choe; Kelvin H Lee
Journal:  Brief Funct Genomic Proteomic       Date:  2006-05-10

6.  Decreased alpha-synuclein in cerebrospinal fluid of aged individuals and subjects with Parkinson's disease.

Authors:  Takahiko Tokuda; Sultan A Salem; David Allsop; Toshiki Mizuno; Masanori Nakagawa; Mohamed M Qureshi; Joseph J Locascio; Michael G Schlossmacher; Omar M A El-Agnaf
Journal:  Biochem Biophys Res Commun       Date:  2006-08-14       Impact factor: 3.575

7.  Molecular isoform distribution and glycosylation of acetylcholinesterase are altered in brain and cerebrospinal fluid of patients with Alzheimer's disease.

Authors:  J Sáez-Valero; G Sberna; C A McLean; D H Small
Journal:  J Neurochem       Date:  1999-04       Impact factor: 5.372

8.  Identification of proteins in human substantia nigra.

Authors:  Efstathia Kitsou; Sheng Pan; Jianpeng Zhang; Min Shi; Aram Zabeti; Dennis W Dickson; Roger Albin; Marla Gearing; Daniel T Kashima; Yan Wang; Richard P Beyer; Yong Zhou; Catherine Pan; W Michael Caudle; Jing Zhang
Journal:  Proteomics Clin Appl       Date:  2008-05       Impact factor: 3.494

9.  Mental symptoms in Parkinson's disease are important contributors to caregiver distress.

Authors:  D Aarsland; J P Larsen; K Karlsen; N G Lim; E Tandberg
Journal:  Int J Geriatr Psychiatry       Date:  1999-10       Impact factor: 3.485

10.  Analysis of glycopeptides using lectin affinity chromatography with MALDI-TOF mass spectrometry.

Authors:  Kazutosi Kubota; Yuji Sato; Yusuke Suzuki; Naoko Goto-Inoue; Tosifusa Toda; Minoru Suzuki; Shin-ichi Hisanaga; Akemi Suzuki; Tamao Endo
Journal:  Anal Chem       Date:  2008-04-15       Impact factor: 6.986

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  32 in total

Review 1.  Rodent models and contemporary molecular techniques: notable feats yet incomplete explanations of Parkinson's disease pathogenesis.

Authors:  Sharawan Yadav; Anubhuti Dixit; Sonal Agrawal; Ashish Singh; Garima Srivastava; Anand Kumar Singh; Pramod Kumar Srivastava; Om Prakash; Mahendra Pratap Singh
Journal:  Mol Neurobiol       Date:  2012-06-27       Impact factor: 5.590

Review 2.  Pesticides as the drivers of neuropsychotic diseases, cancers, and teratogenicity among agro-workers as well as general public.

Authors:  Seema Patel; Sushree Sangeeta
Journal:  Environ Sci Pollut Res Int       Date:  2018-11-08       Impact factor: 4.223

Review 3.  Mass spectrometry: A platform for biomarker discovery and validation for Alzheimer's and Parkinson's diseases.

Authors:  Eugene M Cilento; Lorrain Jin; Tessandra Stewart; Min Shi; Lifu Sheng; Jing Zhang
Journal:  J Neurochem       Date:  2019-01-31       Impact factor: 5.372

Review 4.  Application of proteomics to cerebrovascular disease.

Authors:  Mingming Ning; Mary Lopez; Jing Cao; Ferdinando S Buonanno; Eng H Lo
Journal:  Electrophoresis       Date:  2012-12       Impact factor: 3.535

5.  Targeted mass spectrometric approach for biomarker discovery and validation with nonglycosylated tryptic peptides from N-linked glycoproteins in human plasma.

Authors:  Ju Yeon Lee; Jin Young Kim; Gun Wook Park; Mi Hee Cheon; Kyung-Hoon Kwon; Yeong Hee Ahn; Myeong Hee Moon; Hyoung-Joo Lee; Young Ki Paik; Jong Shin Yoo
Journal:  Mol Cell Proteomics       Date:  2011-09-22       Impact factor: 5.911

Review 6.  Analysis of carbohydrates and glycoconjugates by matrix-assisted laser desorption/ionization mass spectrometry: an update for 2009-2010.

Authors:  David J Harvey
Journal:  Mass Spectrom Rev       Date:  2014-05-26       Impact factor: 10.946

7.  Ultraviolet, Infrared, and High-Low Energy Photodissociation of Post-Translationally Modified Peptides.

Authors:  Mohammad A Halim; Luke MacAleese; Jérôme Lemoine; Rodolphe Antoine; Philippe Dugourd; Marion Girod
Journal:  J Am Soc Mass Spectrom       Date:  2017-10-04       Impact factor: 3.109

8.  Site-specific characterization and quantitation of N-glycopeptides in PKM2 knockout breast cancer cells using DiLeu isobaric tags enabled by electron-transfer/higher-energy collision dissociation (EThcD).

Authors:  Zhengwei Chen; Qing Yu; Ling Hao; Fabao Liu; Jillian Johnson; Zichuan Tian; W John Kao; Wei Xu; Lingjun Li
Journal:  Analyst       Date:  2018-05-29       Impact factor: 4.616

Review 9.  Global and site-specific analysis of protein glycosylation in complex biological systems with Mass Spectrometry.

Authors:  Haopeng Xiao; Fangxu Sun; Suttipong Suttapitugsakul; Ronghu Wu
Journal:  Mass Spectrom Rev       Date:  2019-01-03       Impact factor: 10.946

Review 10.  Glycosylation and other PTMs alterations in neurodegenerative diseases: Current status and future role in neurotrauma.

Authors:  Hussein Abou-Abbass; Hadi Abou-El-Hassan; Hisham Bahmad; Kazem Zibara; Abir Zebian; Rabab Youssef; Joy Ismail; Rui Zhu; Shiyue Zhou; Xue Dong; Mayse Nasser; Marwan Bahmad; Hala Darwish; Yehia Mechref; Firas Kobeissy
Journal:  Electrophoresis       Date:  2016-04-04       Impact factor: 3.535

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