Literature DB >> 19353607

Synthesis and structure of alpha/delta-hybrid peptides--access to novel helix patterns in foldamers.

Gangavaram V M Sharma1, Bommagani Shoban Babu, Kallaganti V S Ramakrishna, Pendem Nagendar, Ajit C Kunwar, Peter Schramm, Carsten Baldauf, Hans-Jörg Hofmann.   

Abstract

Stimulated by an overview on all periodic folding patterns of alpha/delta-hybrid peptides with 1:1 alternating backbone provided by ab initio molecular orbital theory, the first representatives of this foldamer class were synthesized connecting novel C-linked carbo-delta-amino acid constituents and L-Ala. In agreement with theoretical predictions, extensive NMR spectroscopic analyses confirm the formation of new motifs of 13/11-mixed helical patterns in these peptides supported by the rigidity of the D-xylose side chain in the selected delta-amino acid constituents. Relationships between possible helix types in alpha/delta-hybrid peptides and their counterparts in other 1:1 hybrid peptide classes and native alpha-peptides are discussed; these indicate the high potential of these foldamers to mimic native peptide secondary structures. The design of alpha/delta-hybrid peptides provides an opportunity to expand the domain of foldamers and allows the introduction of desired functionalities through the alpha-amino acid constituents.

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Year:  2009        PMID: 19353607     DOI: 10.1002/chem.200802078

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  4 in total

1.  Helix formation in preorganized beta/gamma-peptide foldamers: hydrogen-bond analogy to the alpha-helix without alpha-amino acid residues.

Authors:  Li Guo; Aaron M Almeida; Weicheng Zhang; Andrew G Reidenbach; Soo Hyuk Choi; Ilia A Guzei; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2010-06-16       Impact factor: 15.419

2.  The tripeptide N-Cbz-βGly-Gly-Gly-Obz.

Authors:  Sumesh Nicholas
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-03-14

3.  Conformational properties of 1,4- and 1,5-substituted 1,2,3-triazole amino acids – building units for peptidic foldamers.

Authors:  Nina Kann; Johan R Johansson; Tamás Beke-Somfai
Journal:  Org Biomol Chem       Date:  2015-03-07       Impact factor: 3.876

4.  Fellutamide B Synthetic Path Intermediates with in Vitro Neuroactive Function Shows Mood-Elevating Effect in Stress-Induced Zebrafish Model.

Authors:  R Gajendra Reddy; Soma Shekar Dachavaram; B Raghunath Reddy; Kondbarao Balasaheb Kalyankar; Wenson D Rajan; Scherazad Kootar; Arvind Kumar; Saibal Das; Sumana Chakravarty
Journal:  ACS Omega       Date:  2018-09-05
  4 in total

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