Literature DB >> 19351185

Preparation of mammalian expression vectors incorporating site-specifically platinated-DNA lesions.

Wee Han Ang1, William Wesley Brown, Stephen J Lippard.   

Abstract

FDA-approved platinum-based anticancer drugs, cisplatin, carboplatin, and oxaliplatin, are some of the most effective chemotherapies in clinical use. The cytotoxic action of these compounds against cancer requires a combination of processes including cell entry, drug activation, DNA binding, and transcription inhibition resulting in apoptotic cell death. The drugs form Pt lesions with nuclear DNA, leading to the arrest of key cellular functions and triggering a variety of cellular responses. DNA probes containing Pt-DNA conjugates are important tools for studying the molecular mechanisms of these processes. In order to facilitate investigation of specific Pt-DNA lesion processing within live cells, we devised a strategy for constructing plasmids containing a single site-specific Pt-DNA adduct. The method involves the use of nicking restriction enzymes to create closely spaced tandem gaps on the plasmid followed by removal of the intervening doubly nicked DNA strand to form a short single-stranded gap. Synthetic platinated oligonucleotides were incorporated into the gapped plasmid construct to generate a covalently closed circular platinated plasmid in good yield. We discuss the application of this methodology to prepare plasmids containing a platinum 1,2-d(G*pG*) or 1,3-d(G*pTpG*) intrastrand cross-link, two notable adducts formed by the three clinically approved drugs.

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Year:  2009        PMID: 19351185      PMCID: PMC2765503          DOI: 10.1021/bc900031a

Source DB:  PubMed          Journal:  Bioconjug Chem        ISSN: 1043-1802            Impact factor:   4.774


  27 in total

1.  Fate of RNA polymerase II stalled at a cisplatin lesion.

Authors:  Alexandre Tremeau-Bravard; Thilo Riedl; Jean-Marc Egly; Michael E Dahmus
Journal:  J Biol Chem       Date:  2003-12-12       Impact factor: 5.157

2.  NEBcutter: A program to cleave DNA with restriction enzymes.

Authors:  Tamas Vincze; Janos Posfai; Richard J Roberts
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

3.  Photoaffinity isolation and identification of proteins in cancer cell extracts that bind to platinum-modified DNA.

Authors:  Evan R Guggenheim; Dong Xu; Christiana X Zhang; Pamela V Chang; Stephen J Lippard
Journal:  Chembiochem       Date:  2009-01-05       Impact factor: 3.164

4.  RNA polymerase II blockage by cisplatin-damaged DNA. Stability and polyubiquitylation of stalled polymerase.

Authors:  Yongwon Jung; Stephen J Lippard
Journal:  J Biol Chem       Date:  2005-11-07       Impact factor: 5.157

5.  Gene-specific formation and repair of cisplatin intrastrand adducts and interstrand cross-links in Chinese hamster ovary cells.

Authors:  J C Jones; W P Zhen; E Reed; R J Parker; A Sancar; V A Bohr
Journal:  J Biol Chem       Date:  1991-04-15       Impact factor: 5.157

Review 6.  Cellular processing of platinum anticancer drugs.

Authors:  Dong Wang; Stephen J Lippard
Journal:  Nat Rev Drug Discov       Date:  2005-04       Impact factor: 84.694

7.  cis-Diammine(pyridine)chloroplatinum(II), a monofunctional platinum(II) antitumor agent: Uptake, structure, function, and prospects.

Authors:  Katherine S Lovejoy; Ryan C Todd; Shuzhong Zhang; Michael S McCormick; J Alejandro D'Aquino; Joyce T Reardon; Aziz Sancar; Kathleen M Giacomini; Stephen J Lippard
Journal:  Proc Natl Acad Sci U S A       Date:  2008-06-25       Impact factor: 11.205

8.  DNA adducts of cis-diamminedichloroplatinum(II) and its trans isomer inhibit RNA polymerase II differentially in vivo.

Authors:  J A Mello; S J Lippard; J M Essigmann
Journal:  Biochemistry       Date:  1995-11-14       Impact factor: 3.162

9.  Behavior of T7 RNA polymerase and mammalian RNA polymerase II at site-specific cisplatin adducts in the template DNA.

Authors:  Silvia Tornaletti; Steve M Patrick; John J Turchi; Philip C Hanawalt
Journal:  J Biol Chem       Date:  2003-06-26       Impact factor: 5.157

10.  Analysis of incision sites produced by human cell extracts and purified proteins during nucleotide excision repair of a 1,3-intrastrand d(GpTpG)-cisplatin adduct.

Authors:  J G Moggs; K J Yarema; J M Essigmann; R D Wood
Journal:  J Biol Chem       Date:  1996-03-22       Impact factor: 5.157

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  10 in total

1.  Transcription inhibition by platinum-DNA cross-links in live mammalian cells.

Authors:  Wee Han Ang; MyatNoeZin Myint; Stephen J Lippard
Journal:  J Am Chem Soc       Date:  2010-06-02       Impact factor: 15.419

Review 2.  Understanding and improving platinum anticancer drugs--phenanthriplatin.

Authors:  Timothy C Johnstone; Ga Young Park; Stephen J Lippard
Journal:  Anticancer Res       Date:  2014-01       Impact factor: 2.480

3.  Monofunctional platinum-DNA adducts are strong inhibitors of transcription and substrates for nucleotide excision repair in live mammalian cells.

Authors:  Guangyu Zhu; MyatNoeZin Myint; Wee Han Ang; Lina Song; Stephen J Lippard
Journal:  Cancer Res       Date:  2011-12-16       Impact factor: 12.701

4.  Functional consequence of plasmid DNA modified site-specifically with 7-deaza-deoxyadenosine at a single, programmable site.

Authors:  Wee Han Ang; Stephen J Lippard
Journal:  Chem Commun (Camb)       Date:  2009-09-08       Impact factor: 6.222

5.  Visualizing inhibition of nucleosome mobility and transcription by cisplatin-DNA interstrand crosslinks in live mammalian cells.

Authors:  Guangyu Zhu; Lina Song; Stephen J Lippard
Journal:  Cancer Res       Date:  2013-05-21       Impact factor: 12.701

6.  Nicking enzyme-based internal labeling of DNA at multiple loci.

Authors:  Nicholas Luzzietti; Sabine Knappe; Isabel Richter; Ralf Seidel
Journal:  Nat Protoc       Date:  2012-03-08       Impact factor: 13.491

Review 7.  Natural and engineered nicking endonucleases--from cleavage mechanism to engineering of strand-specificity.

Authors:  Siu-Hong Chan; Barry L Stoddard; Shuang-Yong Xu
Journal:  Nucleic Acids Res       Date:  2010-08-30       Impact factor: 16.971

Review 8.  Excision of Oxidatively Generated Guanine Lesions by Competitive DNA Repair Pathways.

Authors:  Vladimir Shafirovich; Nicholas E Geacintov
Journal:  Int J Mol Sci       Date:  2021-03-07       Impact factor: 5.923

9.  Bacterial Cytological Profiling Reveals the Mechanism of Action of Anticancer Metal Complexes.

Authors:  Yang Sun; David K Heidary; Zhihui Zhang; Christopher I Richards; Edith C Glazer
Journal:  Mol Pharm       Date:  2018-06-30       Impact factor: 4.939

10.  EGFP Reporters for Direct and Sensitive Detection of Mutagenic Bypass of DNA Lesions.

Authors:  Marta Rodriguez-Alvarez; Daria Kim; Andriy Khobta
Journal:  Biomolecules       Date:  2020-06-13
  10 in total

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