Literature DB >> 19348863

Classification of antimicrobial peptide using diversity measure with quadratic discriminant analysis.

Wei Chen1, Liaofu Luo.   

Abstract

Accurate classification of antimicrobial peptides according to their biological activities will facilitate the design of novel antimicrobial agents and the discovery of new therapeutic targets. In this work, an excellent algorithm of Increment of Diversity with Quadratic Discriminant analysis (IDQD) was proposed to classify antimicrobial peptides with diverse biological activities.

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Year:  2009        PMID: 19348863     DOI: 10.1016/j.mimet.2009.03.013

Source DB:  PubMed          Journal:  J Microbiol Methods        ISSN: 0167-7012            Impact factor:   2.363


  5 in total

1.  Prediction of nucleosome DNA formation potential and nucleosome positioning using increment of diversity combined with quadratic discriminant analysis.

Authors:  Xiujuan Zhao; Zhiyong Pei; Jia Liu; Sheng Qin; Lu Cai
Journal:  Chromosome Res       Date:  2010-10-16       Impact factor: 5.239

2.  iNuc-PhysChem: a sequence-based predictor for identifying nucleosomes via physicochemical properties.

Authors:  Wei Chen; Hao Lin; Peng-Mian Feng; Chen Ding; Yong-Chun Zuo; Kuo-Chen Chou
Journal:  PLoS One       Date:  2012-10-29       Impact factor: 3.240

3.  iDPF-PseRAAAC: A Web-Server for Identifying the Defensin Peptide Family and Subfamily Using Pseudo Reduced Amino Acid Alphabet Composition.

Authors:  Yongchun Zuo; Yang Lv; Zhuying Wei; Lei Yang; Guangpeng Li; Guoliang Fan
Journal:  PLoS One       Date:  2015-12-29       Impact factor: 3.240

4.  The organization of nucleosomes around splice sites.

Authors:  Wei Chen; Liaofu Luo; Lirong Zhang
Journal:  Nucleic Acids Res       Date:  2010-01-21       Impact factor: 16.971

5.  Identifying anticancer peptides by using improved hybrid compositions.

Authors:  Feng-Min Li; Xiao-Qian Wang
Journal:  Sci Rep       Date:  2016-09-27       Impact factor: 4.379

  5 in total

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