Literature DB >> 19348745

Aggregation of membrane proteins by cytosolic cross-linkers: theory and simulation of the LAT-Grb2-SOS1 system.

Ambarish Nag1, Michael I Monine, James R Faeder, Byron Goldstein.   

Abstract

Ligand-induced receptor aggregation is a well-known mechanism for initiating intracellular signals but oligomerization of distal signaling molecules may also be required for signal propagation. Formation of complexes containing oligomers of the transmembrane adaptor protein, linker for the activation of T cells (LAT), has been identified as critical in mast cell and T cell activation mediated by immune response receptors. Cross-linking of LAT arises from the formation of a 2:1 complex between the adaptor Grb2 and the nucleotide exchange factor SOS1, which bridges two LAT molecules through the interaction of the Grb2 SH2 domain with a phosphotyrosine on LAT. We model this oligomerization and find that the valence of LAT for Grb2, which ranges from zero to three, is critical in determining the nature and extent of aggregation. A dramatic rise in oligomerization can occur when the valence switches from two to three. For valence three, an equilibrium theory predicts the possibility of forming a gel-like phase. This prediction is confirmed by stochastic simulations, which make additional predictions about the size of the gel and the kinetics of LAT oligomerization. We discuss the model predictions in light of recent experiments on RBL-2H3 and Jurkat E6.1 cells and suggest that the gel phase has been observed in activated mast cells.

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Year:  2009        PMID: 19348745      PMCID: PMC2711295          DOI: 10.1016/j.bpj.2009.01.019

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  48 in total

1.  Solution structure of Grb2 reveals extensive flexibility necessary for target recognition.

Authors:  S Yuzawa; M Yokochi; H Hatanaka; K Ogura; M Kataoka; K Miura ; V Mandiyan; J Schlessinger; F Inagaki
Journal:  J Mol Biol       Date:  2001-02-23       Impact factor: 5.469

Review 2.  Cell signaling by receptor tyrosine kinases.

Authors:  J Schlessinger
Journal:  Cell       Date:  2000-10-13       Impact factor: 41.582

3.  Molecular cloning of a novel gene encoding a membrane-associated adaptor protein (LAX) in lymphocyte signaling.

Authors:  Minghua Zhu; Erin Janssen; Kin Leung; Weiguo Zhang
Journal:  J Biol Chem       Date:  2002-09-30       Impact factor: 5.157

Review 4.  Transmembrane signaling: the joy of aggregation.

Authors:  H Metzger
Journal:  J Immunol       Date:  1992-09-01       Impact factor: 5.422

5.  The SH2 and SH3 domain-containing protein GRB2 links receptor tyrosine kinases to ras signaling.

Authors:  E J Lowenstein; R J Daly; A G Batzer; W Li; B Margolis; R Lammers; A Ullrich; E Y Skolnik; D Bar-Sagi; J Schlessinger
Journal:  Cell       Date:  1992-08-07       Impact factor: 41.582

6.  Oligomerization of signaling complexes by the multipoint binding of GRB2 to both LAT and SOS1.

Authors:  Jon C D Houtman; Hiroshi Yamaguchi; Mira Barda-Saad; Alex Braiman; Brent Bowden; Ettore Appella; Peter Schuck; Lawrence E Samelson
Journal:  Nat Struct Mol Biol       Date:  2006-08-13       Impact factor: 15.369

7.  Studying multisite binary and ternary protein interactions by global analysis of isothermal titration calorimetry data in SEDPHAT: application to adaptor protein complexes in cell signaling.

Authors:  Jon C D Houtman; Patrick H Brown; Brent Bowden; Hiroshi Yamaguchi; Ettore Appella; Lawrence E Samelson; Peter Schuck
Journal:  Protein Sci       Date:  2007-01       Impact factor: 6.725

8.  A synthetic trivalent hapten that aggregates anti-2,4-DNP IgG into bicyclic trimers.

Authors:  Basar Bilgiçer; Demetri T Moustakas; George M Whitesides
Journal:  J Am Chem Soc       Date:  2007-02-28       Impact factor: 15.419

9.  Multiple-state reactions between the epidermal growth factor receptor and Grb2 as observed by using single-molecule analysis.

Authors:  Miki Morimatsu; Hiroaki Takagi; Kosuke G Ota; Ryo Iwamoto; Toshio Yanagida; Yasushi Sako
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-08       Impact factor: 11.205

10.  Kinetic Monte Carlo method for rule-based modeling of biochemical networks.

Authors:  Jin Yang; Michael I Monine; James R Faeder; William S Hlavacek
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2008-09-10
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  37 in total

1.  Analyzing the homeostasis of signaling proteins by a combination of Western blot and fluorescence correlation spectroscopy.

Authors:  Yi-Da Chung; Michael D Sinzinger; Petra Bovee-Geurts; Marina Krause; Sip Dinkla; Irma Joosten; Werner J Koopman; Merel J W Adjobo-Hermans; Roland Brock
Journal:  Biophys J       Date:  2011-12-07       Impact factor: 4.033

2.  Shaping the response: the role of FcεRI and Syk expression levels in mast cell signaling.

Authors:  Ambarish Nag; James R Faeder; Byron Goldstein
Journal:  IET Syst Biol       Date:  2010-11       Impact factor: 1.615

Review 3.  The linker for activation of T cells (LAT) signaling hub: from signaling complexes to microclusters.

Authors:  Lakshmi Balagopalan; Robert L Kortum; Nathan P Coussens; Valarie A Barr; Lawrence E Samelson
Journal:  J Biol Chem       Date:  2015-09-09       Impact factor: 5.157

4.  Hierarchical graphs for rule-based modeling of biochemical systems.

Authors:  Nathan W Lemons; Bin Hu; William S Hlavacek
Journal:  BMC Bioinformatics       Date:  2011-02-02       Impact factor: 3.169

5.  Multipoint binding of the SLP-76 SH2 domain to ADAP is critical for oligomerization of SLP-76 signaling complexes in stimulated T cells.

Authors:  Nathan P Coussens; Ryo Hayashi; Patrick H Brown; Lakshmi Balagopalan; Andrea Balbo; Itoro Akpan; Jon C D Houtman; Valarie A Barr; Peter Schuck; Ettore Appella; Lawrence E Samelson
Journal:  Mol Cell Biol       Date:  2013-08-26       Impact factor: 4.272

6.  Efficient stochastic simulation of chemical kinetics networks using a weighted ensemble of trajectories.

Authors:  Rory M Donovan; Andrew J Sedgewick; James R Faeder; Daniel M Zuckerman
Journal:  J Chem Phys       Date:  2013-09-21       Impact factor: 3.488

7.  Modeling multivalent ligand-receptor interactions with steric constraints on configurations of cell-surface receptor aggregates.

Authors:  Michael I Monine; Richard G Posner; Paul B Savage; James R Faeder; William S Hlavacek
Journal:  Biophys J       Date:  2010-01-06       Impact factor: 4.033

8.  The efficiency of reactant site sampling in network-free simulation of rule-based models for biochemical systems.

Authors:  Jin Yang; William S Hlavacek
Journal:  Phys Biol       Date:  2011-08-10       Impact factor: 2.583

9.  Mapping the stochastic sequence of individual ligand-receptor binding events to cellular activation: T cells act on the rare events.

Authors:  Jenny J Y Lin; Shalini T Low-Nam; Katherine N Alfieri; Darren B McAffee; Nicole C Fay; Jay T Groves
Journal:  Sci Signal       Date:  2019-01-15       Impact factor: 8.192

10.  Differential regulation of type I interferon and epidermal growth factor pathways by a human Respirovirus virulence factor.

Authors:  Grégory Caignard; Anastassia V Komarova; Mehdi Bouraï; Thomas Mourez; Yves Jacob; Louis M Jones; Flore Rozenberg; Astrid Vabret; François Freymuth; Frédéric Tangy; Pierre-Olivier Vidalain
Journal:  PLoS Pathog       Date:  2009-09-18       Impact factor: 6.823

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