Literature DB >> 19344749

Selenoproteins in Archaea and Gram-positive bacteria.

Tilmann Stock1, Michael Rother.   

Abstract

Selenium is an essential trace element for many organisms by serving important catalytic roles in the form of the 21st co-translationally inserted amino acid selenocysteine. It is mostly found in redox-active proteins in members of all three domains of life and analysis of the ever-increasing number of genome sequences has facilitated identification of the encoded selenoproteins. Available data from biochemical, sequence, and structure analyses indicate that Gram-positive bacteria synthesize and incorporate selenocysteine via the same pathway as enterobacteria. However, recent in vivo studies indicate that selenocysteine-decoding is much less stringent in Gram-positive bacteria than in Escherichia coli. For years, knowledge about the pathway of selenocysteine synthesis in Archaea and Eukarya was only fragmentary, but genetic and biochemical studies guided by analysis of genome sequences of Sec-encoding archaea has not only led to the characterization of the pathways but has also shown that they are principally identical. This review summarizes current knowledge about the metabolic pathways of Archaea and Gram-positive bacteria where selenium is involved, about the known selenoproteins, and about the respective pathways employed in selenoprotein synthesis.

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Year:  2009        PMID: 19344749     DOI: 10.1016/j.bbagen.2009.03.022

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  25 in total

Review 1.  Translational recoding in archaea.

Authors:  Beatrice Cobucci-Ponzano; Mosè Rossi; Marco Moracci
Journal:  Extremophiles       Date:  2012-09-27       Impact factor: 2.395

Review 2.  Threading the needle: getting selenocysteine into proteins.

Authors:  Jesse Donovan; Paul R Copeland
Journal:  Antioxid Redox Signal       Date:  2010-04-01       Impact factor: 8.401

3.  Random mutagenesis identifies factors involved in formate-dependent growth of the methanogenic archaeon Methanococcus maripaludis.

Authors:  Christian Sattler; Sandro Wolf; Julia Fersch; Stefan Goetz; Michael Rother
Journal:  Mol Genet Genomics       Date:  2013-06-26       Impact factor: 3.291

4.  Comparative genomic inference suggests mixotrophic lifestyle for Thorarchaeota.

Authors:  Yang Liu; Zhichao Zhou; Jie Pan; Brett J Baker; Ji-Dong Gu; Meng Li
Journal:  ISME J       Date:  2018-02-14       Impact factor: 10.302

5.  Bioinformatics of Selenoproteins.

Authors:  Didac Santesmasses; Marco Mariotti; Vadim N Gladyshev
Journal:  Antioxid Redox Signal       Date:  2020-04-23       Impact factor: 8.401

Review 6.  Selenocysteine, pyrrolysine, and the unique energy metabolism of methanogenic archaea.

Authors:  Michael Rother; Joseph A Krzycki
Journal:  Archaea       Date:  2010-08-17       Impact factor: 3.273

7.  Insights into the evolution of Archaea and eukaryotic protein modifier systems revealed by the genome of a novel archaeal group.

Authors:  Takuro Nunoura; Yoshihiro Takaki; Jungo Kakuta; Shinro Nishi; Junichi Sugahara; Hiromi Kazama; Gab-Joo Chee; Masahira Hattori; Akio Kanai; Haruyuki Atomi; Ken Takai; Hideto Takami
Journal:  Nucleic Acids Res       Date:  2010-12-15       Impact factor: 16.971

Review 8.  Genetic code flexibility in microorganisms: novel mechanisms and impact on physiology.

Authors:  Jiqiang Ling; Patrick O'Donoghue; Dieter Söll
Journal:  Nat Rev Microbiol       Date:  2015-09-22       Impact factor: 60.633

Review 9.  Evolution of the archaeal and mammalian information processing systems: towards an archaeal model for human disease.

Authors:  Zhe Lyu; William B Whitman
Journal:  Cell Mol Life Sci       Date:  2016-06-03       Impact factor: 9.261

Review 10.  NADPH-dependent and -independent disulfide reductase systems.

Authors:  Colin G Miller; Arne Holmgren; Elias S J Arnér; Edward E Schmidt
Journal:  Free Radic Biol Med       Date:  2018-03-30       Impact factor: 7.376

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