Literature DB >> 19344736

The rules of disorder or why disorder rules.

Jörg Gsponer1, M Madan Babu.   

Abstract

The finding that a large fraction of proteins (over 30%) in eukaryotic cells lack a unique three-dimensional structure but are functional has forced the scientific community to review its understanding of the structure-function paradigm. The involvement of many of these intrinsically unstructured proteins (IUPs) in intracellular signalling and regulatory processes as well as their central positioning (as interaction hubs) in recently mapped protein interaction networks is particularly intriguing. Here, we review the functional and structural properties of IUPs such as (i) their facilitated regulation via diverse post-translational modifications of specific amino acids (ii) scaffolding and recruitment of different binding partners in space and time via the "fly-casting" mechanism, through peptide motifs and by coupling folding with binding and (iii) conformational variability and adaptability. All of these properties allow these proteins to hold key positions in cellular organisation and regulation which in turn make them tractable as drug targets. In addition, we discuss how such properties, individually and in combination, facilitate combinatorial regulation and re-use of the same component in multiple biological processes.

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Year:  2009        PMID: 19344736     DOI: 10.1016/j.pbiomolbio.2009.03.001

Source DB:  PubMed          Journal:  Prog Biophys Mol Biol        ISSN: 0079-6107            Impact factor:   3.667


  77 in total

1.  The C-terminus of ICln is natively disordered but displays local structural preformation.

Authors:  Andreas Schedlbauer; Rosaria Gandini; Georg Kontaxis; Markus Paulmichl; Johannes Furst; Robert Konrat
Journal:  Cell Physiol Biochem       Date:  2011-12-16

2.  Differential and integral views of genetics in computational systems biology.

Authors:  Denis Noble
Journal:  Interface Focus       Date:  2010-11-17       Impact factor: 3.906

3.  An unusual hydrophobic core confers extreme flexibility to HEAT repeat proteins.

Authors:  Christian Kappel; Ulrich Zachariae; Nicole Dölker; Helmut Grubmüller
Journal:  Biophys J       Date:  2010-09-08       Impact factor: 4.033

4.  Deletion of immunoproteasome subunits imprints on the transcriptome and has a broad impact on peptides presented by major histocompatibility complex I molecules.

Authors:  Danielle de Verteuil; Tara L Muratore-Schroeder; Diana P Granados; Marie-Hélène Fortier; Marie-Pierre Hardy; Alexandre Bramoullé; Etienne Caron; Krystel Vincent; Sylvie Mader; Sébastien Lemieux; Pierre Thibault; Claude Perreault
Journal:  Mol Cell Proteomics       Date:  2010-05-19       Impact factor: 5.911

5.  Evolution of structurally disordered proteins promotes neostructuralization.

Authors:  Jessica Siltberg-Liberles
Journal:  Mol Biol Evol       Date:  2010-10-29       Impact factor: 16.240

Review 6.  The etiology of human age-related cataract. Proteins don't last forever.

Authors:  Roger J W Truscott; Michael G Friedrich
Journal:  Biochim Biophys Acta       Date:  2015-08-28

7.  Structural signatures of DRD4 mutants revealed using molecular dynamics simulations: Implications for drug targeting.

Authors:  Nidhi Jatana; Lipi Thukral; N Latha
Journal:  J Mol Model       Date:  2015-12-17       Impact factor: 1.810

8.  Intrinsic protein disorder in human pathways.

Authors:  Jessica H Fong; Benjamin A Shoemaker; Anna R Panchenko
Journal:  Mol Biosyst       Date:  2011-10-20

9.  Putting the pieces together: a crystal clear window into CLC anion channel regulation.

Authors:  Kevin Strange
Journal:  Channels (Austin)       Date:  2011-03-01       Impact factor: 2.581

10.  Expanding the proteome: disordered and alternatively folded proteins.

Authors:  H Jane Dyson
Journal:  Q Rev Biophys       Date:  2011-07-01       Impact factor: 5.318

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