Literature DB >> 19341801

Development of a human brain diffusion tensor template.

Huiling Peng1, Anton Orlichenko, Robert J Dawe, Gady Agam, Shengwei Zhang, Konstantinos Arfanakis.   

Abstract

The development of a brain template for diffusion tensor imaging (DTI) is crucial for comparisons of neuronal structural integrity and brain connectivity across populations, as well as for the development of a white matter atlas. Previous efforts to produce a DTI brain template have been compromised by factors related to image quality, the effectiveness of the image registration approach, the appropriateness of subject inclusion criteria, and the completeness and accuracy of the information summarized in the final template. The purpose of this work was to develop a DTI human brain template using techniques that address the shortcomings of previous efforts. Therefore, data containing minimal artifacts were first obtained on 67 healthy human subjects selected from an age-group with relatively similar diffusion characteristics (20-40 years of age), using an appropriate DTI acquisition protocol. Non-linear image registration based on mean diffusion-weighted and fractional anisotropy images was employed. DTI brain templates containing median and mean tensors were produced in ICBM-152 space and made publicly available. The resulting set of DTI templates is characterized by higher image sharpness, provides the ability to distinguish smaller white matter fiber structures, contains fewer image artifacts, than previously developed templates, and to our knowledge, is one of only two templates produced based on a relatively large number of subjects. Furthermore, median tensors were shown to better preserve the diffusion characteristics at the group level than mean tensors. Finally, white matter fiber tractography was applied on the template and several fiber-bundles were traced.

Entities:  

Mesh:

Year:  2009        PMID: 19341801      PMCID: PMC2693098          DOI: 10.1016/j.neuroimage.2009.03.046

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  46 in total

1.  Diffusion tensor MRI assesses corticospinal tract damage in ALS.

Authors:  C M Ellis; A Simmons; D K Jones; J Bland; J M Dawson; M A Horsfield; S C Williams; P N Leigh
Journal:  Neurology       Date:  1999-09-22       Impact factor: 9.910

2.  A study of rotationally invariant and symmetric indices of diffusion anisotropy.

Authors:  N G Papadakis; D Xing; G C Houston; J M Smith; M I Smith; M F James; A A Parsons; C L Huang; L D Hall; T A Carpenter
Journal:  Magn Reson Imaging       Date:  1999-07       Impact factor: 2.546

3.  Microstructure of temporo-parietal white matter as a basis for reading ability: evidence from diffusion tensor magnetic resonance imaging.

Authors:  T Klingberg; M Hedehus; E Temple; T Salz; J D Gabrieli; M E Moseley; R A Poldrack
Journal:  Neuron       Date:  2000-02       Impact factor: 17.173

4.  A geometric analysis of diffusion tensor measurements of the human brain.

Authors:  A L Alexander; K Hasan; G Kindlmann; D L Parker; J S Tsuruda
Journal:  Magn Reson Med       Date:  2000-08       Impact factor: 4.668

5.  Large deformation diffeomorphic metric mapping of vector fields.

Authors:  Yan Cao; Michael I Miller; Raimond L Winslow; Laurent Younes
Journal:  IEEE Trans Med Imaging       Date:  2005-09       Impact factor: 10.048

6.  Cross-subject comparison of principal diffusion direction maps.

Authors:  Armin Schwartzman; Robert F Dougherty; Jonathan E Taylor
Journal:  Magn Reson Med       Date:  2005-06       Impact factor: 4.668

7.  Deformable registration of diffusion tensor MR images with explicit orientation optimization.

Authors:  Hui Zhang; Paul A Yushkevich; Daniel C Alexander; James C Gee
Journal:  Med Image Anal       Date:  2006-08-08       Impact factor: 8.545

8.  Turboprop: improved PROPELLER imaging.

Authors:  James G Pipe; Nicholas Zwart
Journal:  Magn Reson Med       Date:  2006-02       Impact factor: 4.668

9.  White matter tractography by means of Turboprop diffusion tensor imaging.

Authors:  Konstantinos Arfanakis; Minzhi Gui; Mariana Lazar
Journal:  Ann N Y Acad Sci       Date:  2005-12       Impact factor: 5.691

10.  Disruption of brain white matter microstructure by excessive intracellular and extracellular fluid in alcoholism: evidence from diffusion tensor imaging.

Authors:  Adolf Pfefferbaum; Edith V Sullivan
Journal:  Neuropsychopharmacology       Date:  2005-02       Impact factor: 7.853

View more
  23 in total

1.  NTU-DSI-122: A diffusion spectrum imaging template with high anatomical matching to the ICBM-152 space.

Authors:  Yung-Chin Hsu; Yu-Chun Lo; Yu-Jen Chen; Van Jay Wedeen; Wen-Yih Isaac Tseng
Journal:  Hum Brain Mapp       Date:  2015-06-11       Impact factor: 5.038

2.  Cellular Automata Tractography: Fast Geodesic Diffusion MR Tractography and Connectivity Based Segmentation on the GPU.

Authors:  Andac Hamamci
Journal:  Neuroinformatics       Date:  2020-01

3.  Inter-Subject Variability of Axonal Injury in Diffuse Traumatic Brain Injury.

Authors:  Jeffrey B Ware; Tessa Hart; John Whyte; Amanda Rabinowitz; John A Detre; Junghoon Kim
Journal:  J Neurotrauma       Date:  2017-05-03       Impact factor: 5.269

4.  A new approach to structural integrity assessment based on axial and radial diffusivities.

Authors:  Claudia A M Wheeler-Kingshott; Olga Ciccarelli; Torben Schneider; Daniel C Alexander; Mara Cercignani
Journal:  Funct Neurol       Date:  2012 Apr-Jun

5.  Development of a high angular resolution diffusion imaging human brain template.

Authors:  Anna Varentsova; Shengwei Zhang; Konstantinos Arfanakis
Journal:  Neuroimage       Date:  2014-01-15       Impact factor: 6.556

6.  Decreased frontostriatal microstructural organization in attention deficit/hyperactivity disorder.

Authors:  Patrick de Zeeuw; René C W Mandl; Hilleke E Hulshoff Pol; Herman van Engeland; Sarah Durston
Journal:  Hum Brain Mapp       Date:  2011-08-08       Impact factor: 5.038

7.  Role of standardized and study-specific human brain diffusion tensor templates in inter-subject spatial normalization.

Authors:  Shengwei Zhang; Konstantinos Arfanakis
Journal:  J Magn Reson Imaging       Date:  2012-10-03       Impact factor: 4.813

8.  Population-averaged atlas of the macroscale human structural connectome and its network topology.

Authors:  Fang-Cheng Yeh; Sandip Panesar; David Fernandes; Antonio Meola; Masanori Yoshino; Juan C Fernandez-Miranda; Jean M Vettel; Timothy Verstynen
Journal:  Neuroimage       Date:  2018-05-24       Impact factor: 6.556

9.  DTI values in key white matter tracts from infancy through adolescence.

Authors:  A Cancelliere; F T Mangano; E L Air; B V Jones; M Altaye; A Rajagopal; S K Holland; D A Hertzler; W Yuan
Journal:  AJNR Am J Neuroradiol       Date:  2013-01-31       Impact factor: 3.825

10.  Development of human white matter fiber pathways: From newborn to adult ages.

Authors:  Andrew H Cohen; Rongpin Wang; Molly Wilkinson; Patrick MacDonald; Ashley R Lim; Emi Takahashi
Journal:  Int J Dev Neurosci       Date:  2016-03-15       Impact factor: 2.457

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.