Literature DB >> 19326112

Identification of the folding inhibitors of hen-egg lysozyme: gathering the right tools.

Martina Caldarini1, Ludovico Sutto, Carlo Camilloni, Francesca Vasile, Ricardo A Broglia, Guido Tiana.   

Abstract

The unfolded state of proteins displays a surprisingly rich amount of local native structure, which appears to be critical for driving the protein to its native state. Peptides with the same sequence of the corresponding structured segments can be used to interfere with the correct folding of the protein. Using model simulations, we investigate the folding of hen-egg lysozyme, identifying its key segments. Activity assays, NMR and circular dichroism experiments are used to screen the peptides which are able to inhibit the folding of lysozyme. Few peptides, corresponding to the segments of the protein which are structured in the unfolded state, are identified to have significant inhibitory effects.

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Year:  2009        PMID: 19326112     DOI: 10.1007/s00249-009-0441-1

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  22 in total

1.  Persistence of native-like topology in a denatured protein in 8 M urea.

Authors:  D Shortle; M S Ackerman
Journal:  Science       Date:  2001-07-20       Impact factor: 47.728

2.  Understanding the determinants of stability and folding of small globular proteins from their energetics.

Authors:  Guido Tiana; Fabio Simona; Giacomo M S De Mori; Ricardo A Broglia; Giorgio Colombo
Journal:  Protein Sci       Date:  2004-01       Impact factor: 6.725

3.  Design of HIV-1-PR inhibitors that do not create resistance: blocking the folding of single monomers.

Authors:  Ricardo A Broglia; Guido Tiana; Ludovico Sutto; Davide Provasi; Fabio Simona
Journal:  Protein Sci       Date:  2005-10       Impact factor: 6.725

4.  Identification and characterization of folding inhibitors of hen egg lysozyme: an example of a new paradigm of drug design.

Authors:  M Caldarini; F Vasile; D Provasi; R Longhi; G Tiana; R A Broglia
Journal:  Proteins       Date:  2009-02-01

5.  High populations of non-native structures in the denatured state are compatible with the formation of the native folded state.

Authors:  F J Blanco; L Serrano; J D Forman-Kay
Journal:  J Mol Biol       Date:  1998-12-11       Impact factor: 5.469

Review 6.  The folding process of hen lysozyme: a perspective from the 'new view'.

Authors:  A Matagne; C M Dobson
Journal:  Cell Mol Life Sci       Date:  1998-04       Impact factor: 9.261

Review 7.  Understanding how proteins fold: the lysozyme story so far.

Authors:  C M Dobson; P A Evans; S E Radford
Journal:  Trends Biochem Sci       Date:  1994-01       Impact factor: 13.807

8.  Proteins in 6-M guanidine hydrochloride. Demonstration of random coil behavior.

Authors:  C Tanford; K Kawahara; S Lapanje
Journal:  J Biol Chem       Date:  1966-04-25       Impact factor: 5.157

9.  Short-range, long-range and transition state interactions in the denatured state of ACBP from residual dipolar couplings.

Authors:  Wolfgang Fieber; Sigridur Kristjansdottir; Flemming M Poulsen
Journal:  J Mol Biol       Date:  2004-06-18       Impact factor: 5.469

10.  Conformational properties of four peptides spanning the sequence of hen lysozyme.

Authors:  J J Yang; M Buck; M Pitkeathly; M Kotik; D T Haynie; C M Dobson; S E Radford
Journal:  J Mol Biol       Date:  1995-09-29       Impact factor: 5.469

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  1 in total

1.  Mapping Protein-Protein Interactions of the Resistance-Related Bacterial Zeta Toxin-Epsilon Antitoxin Complex (ε₂ζ₂) with High Affinity Peptide Ligands Using Fluorescence Polarization.

Authors:  María Isabel Fernández-Bachiller; Iwona Brzozowska; Norbert Odolczyk; Urszula Zielenkiewicz; Piotr Zielenkiewicz; Jörg Rademann
Journal:  Toxins (Basel)       Date:  2016-07-16       Impact factor: 4.546

  1 in total

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