Literature DB >> 19324594

Phylogeny, taxonomy, and astounding genetic diversity of glissomonadida ord. nov., the dominant gliding zooflagellates in soil (Protozoa: Cercozoa).

Alexis T Howe1, David Bass, Keith Vickerman, Ema E Chao, Thomas Cavalier-Smith.   

Abstract

The cercozoan family Heteromitidae comprises morphologically rather uniform gliding zooflagellates, including Bodomorpha and Heteromita, the most ubiquitous and numerous soil protozoa. The generally used name 'Heteromita globosa' for the commonest gliding biflagellates is incorrect. 'Heteromita' Dujardin, 1841 originally contained only two probable euglenozoans and an unidentifiable flagellate, making it inapplicable to Cercozoa. Accordingly, we establish a new order Glissomonadida for Heteromitidae sensu Cavalier-Smith and Chao, 2003. We cultured over 100 glissomonad strains, sequenced their 18S rRNA genes, and studied their behaviour and morphology by differential interference contrast high definition video microscopy. Group-specific amplification and sequencing of over 450 18S rRNA genes from environmental DNA shows that one temperate grassland plot has hundreds of species, there are thousands globally, and tropical species often differ. Glissomonads are probably sisters of Pansomonadida, not Cercomonadida. In a thorough overhaul of glissomonad taxonomy we describe 29 new species, new genera Sandona, Neoheteromita, Flectomonas, Allapsa, and Teretomonas, and morphologically distinctive families: Sandonidae, Allapsidae, Bodomorphidae, and Proleptomonadidae.

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Year:  2009        PMID: 19324594     DOI: 10.1016/j.protis.2008.11.007

Source DB:  PubMed          Journal:  Protist        ISSN: 1434-4610


  20 in total

1.  Persistence of free-living protozoan communities across rearing cycles in commercial poultry houses.

Authors:  Julie Baré; Kurt Houf; Tine Verstraete; Mario Vaerewijck; Koen Sabbe
Journal:  Appl Environ Microbiol       Date:  2011-01-14       Impact factor: 4.792

2.  Scale evolution in Paraphysomonadida (Chrysophyceae): Sequence phylogeny and revised taxonomy of Paraphysomonas, new genus Clathromonas, and 25 new species.

Authors:  Josephine Margaret Scoble; Thomas Cavalier-Smith
Journal:  Eur J Protistol       Date:  2014-08-19       Impact factor: 3.020

3.  Metatranscriptomic census of active protists in soils.

Authors:  Stefan Geisen; Alexander T Tveit; Ian M Clark; Andreas Richter; Mette M Svenning; Michael Bonkowski; Tim Urich
Journal:  ISME J       Date:  2015-03-27       Impact factor: 10.302

4.  A critique of Rossberg et al.: Noise obscures the genetic signal of meiobiotal ecospecies in ecogenomic datasets.

Authors:  M J Morgan; D Bass; H Bik; C W Birky; M Blaxter; M D Crisp; S Derycke; D Fitch; D Fontaneto; C M Hardy; A J King; K C Kiontke; T Moens; J W Pawlowski; D Porazinska; C Q Tang; W K Thomas; D K Yeates; S Creer
Journal:  Proc Biol Sci       Date:  2014-03-26       Impact factor: 5.349

5.  Multigene phylogeny and cell evolution of chromist infrakingdom Rhizaria: contrasting cell organisation of sister phyla Cercozoa and Retaria.

Authors:  Thomas Cavalier-Smith; Ema E Chao; Rhodri Lewis
Journal:  Protoplasma       Date:  2018-04-17       Impact factor: 3.356

6.  Environmental barcoding reveals massive dinoflagellate diversity in marine environments.

Authors:  Rowena F Stern; Ales Horak; Rose L Andrew; Mary-Alice Coffroth; Robert A Andersen; Frithjof C Küpper; Ian Jameson; Mona Hoppenrath; Benoît Véron; Fumai Kasai; Jerry Brand; Erick R James; Patrick J Keeling
Journal:  PLoS One       Date:  2010-11-15       Impact factor: 3.240

7.  Using environmental niche models to test the 'everything is everywhere' hypothesis for Badhamia.

Authors:  María Aguilar; Anna-Maria Fiore-Donno; Carlos Lado; Thomas Cavalier-Smith
Journal:  ISME J       Date:  2013-10-17       Impact factor: 10.302

8.  Bacterial and protozoan dynamics upon thawing and freezing of an active layer permafrost soil.

Authors:  Morten Schostag; Anders Priemé; Samuel Jacquiod; Jakob Russel; Flemming Ekelund; Carsten Suhr Jacobsen
Journal:  ISME J       Date:  2019-01-28       Impact factor: 10.302

9.  Global biogeography of highly diverse protistan communities in soil.

Authors:  Scott T Bates; Jose C Clemente; Gilberto E Flores; William Anthony Walters; Laura Wegener Parfrey; Rob Knight; Noah Fierer
Journal:  ISME J       Date:  2012-12-13       Impact factor: 10.302

10.  Evolution of Rhizaria: new insights from phylogenomic analysis of uncultivated protists.

Authors:  Fabien Burki; Alexander Kudryavtsev; Mikhail V Matz; Galina V Aglyamova; Simon Bulman; Mark Fiers; Patrick J Keeling; Jan Pawlowski
Journal:  BMC Evol Biol       Date:  2010-12-02       Impact factor: 3.260

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