Literature DB >> 19318425

dCAS: a desktop application for cDNA sequence annotation.

Yongjian Guo1, Jose M C Ribeiro, Jennifer M Anderson, Stephan Bour.   

Abstract

MOTIVATION: Understanding gene regulation and expression is the key to the advancement of biology. EST sequence assembly and analysis provide unique benefits in this regard. We have developed a standalone application, dCAS (Desktop cDNA Annotation System), which performs automated EST cleaning, clustering, assembly and annotation on a desktop computer. Compared with other available tools, dCAS provides a more convenient and user-friendly solution to biologists for extracting biological meaning from sequence data. AVAILABILITY: The dCAS package is distributed freely. A cross-platform installer and associated sequence databases can be downloaded at: http://exon.niaid.nih.gov/applications.html.

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Year:  2009        PMID： 19318425      PMCID： PMC2732306          DOI： 10.1093/bioinformatics/btp129

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  11 in total

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10.  Transcriptional profiles of mating-responsive genes from testes and male accessory glands of the Mediterranean fruit fly, Ceratitis capitata.

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Journal:  PLoS One       Date:  2012-10-11       Impact factor: 3.240
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